Gene Vapar_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3936 
Symbol 
ID7970365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4176298 
End bp4177035 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID644794522 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_002945816 
Protein GI239816906 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATCA AGATCATCAA TCCCAACACC ACCTGGAGCA TGACCGAGAA GATCGGCGCC 
TGCGCCCGCG CGGTGGCGAG CGCCGGCACG CAGATCGTCG CGGTCAGCCC GGCCATGGGG
CCGGCTTCCA TCGAAAGCCA CTACGACGAG GCGCTGGCCG TGCCCGGCCT GCTGCAGGAA
ATTGCGGCCG GCGAGCGCGA AGGCTTCGAG GGCTACGTGA TCGCCTGCTT CGGCGATCCG
GGCCTGAGGG CCGCACGCGA ACTGGCGCGC GGTCCGGTGG TGGGCATTGC CGAAGCCGCG
ATGCACCTGG CCAGCATGGT GGGCAGCCGC TTCAGCGTGG TGACCACGCT CGGCCGCACG
ATGGGCCAGG CCTGGCACCT GGCCGAGGTC TACGGCATGG AGCGCTTCTG CGCCAAGGTG
CGCGCCTGCG AATTGCCGGT GCTCGAGCTC GAGGAGCCCG GCTCCCAGGC ACGCGAGCGC
ATCGTCGACG AATGCCGCCG CGCGCTCGAG GAAGACGGCG CCGACTGCAT CGTGCTCGGC
TGCGCCGGCA TGACCGACCT GTGCGAGCAC ATCGGCGGCC TGCTCGGCGT GCCGGTGATC
GACGGCGTGG CTGCGGCCAC CCGGCTGGTC GAATCGCTGG TCGCGCTGAA GCTCTCGACC
AGCAAGCGCG GCGAGTTGGC CCATCCGCTG CCCAAGGCCA TGAAGGGCGC GCTCGAGGGC
TTCACCTTGC GCGGCTGA
 
Protein sequence
MRIKIINPNT TWSMTEKIGA CARAVASAGT QIVAVSPAMG PASIESHYDE ALAVPGLLQE 
IAAGEREGFE GYVIACFGDP GLRAARELAR GPVVGIAEAA MHLASMVGSR FSVVTTLGRT
MGQAWHLAEV YGMERFCAKV RACELPVLEL EEPGSQARER IVDECRRALE EDGADCIVLG
CAGMTDLCEH IGGLLGVPVI DGVAAATRLV ESLVALKLST SKRGELAHPL PKAMKGALEG
FTLRG