| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3933 |
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| Symbol | |
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| ID | 7970362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4173151 |
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| End bp | 4174071 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794519 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945813 |
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| Protein GI | 239816903 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCA AGCAGCTCGA GGCCCTGTAC TGGATCGCCA AGCTCGGCGG CTTCGCGCAA
GCGGCCAACC AGCTGCATAC CTCGCAGTCG GCCGTGTCCA AGCGGGTGCA TGAACTCGAG
CTGCTGTTCG ACACCGAGCT GTTCGACCGC AGCCAGCGCA CCGCGCGGCT CACCGAAAAG
GGCGAGGAGA TGTTCGTGCT CGCCGCCCGG CTGCTCGAGC AGCGCGATGC CGCAGTCGAG
CAGTTCAGCA AGCCCGGCGT GGTGCAGCGC CGGCTGCGCA TCGGCGTGAC CGAGCTCACG
GCCATGACGT GGCTGCCCCG GCTGGTGGGC GTGATCCAGC GGCACTACCC CAAGGTCGTC
CTCGAGCCCG ACGTGGACGA CAGCCTGCAG CTGCGCGACA AGCTGCTGGC CGACGAGCTC
GACCTGGTGA TCGTGCCCGA CACCTTTGCC GATTCGCGCA TGCAGAGCAA GGCCATCGGC
AAGGTGCAAA GCGCCTGGAT GTGCAAGCCC GGCGTGGTGG CCGCCACCGG CACGGTGCGG
CTGCACGAGC TCGCGCGCCA CCGCATGCTG GTGCAGGGCA AGAACTCGGG CACCGGGCGC
GCCTACGACG CCTGGATGAA GGACCAGGGC GTGCAGCCCG CCGACACCAT CGTGGTGAGC
AACCTCGTGG CGCTGACCGG GCTCACGGTG TCGGGCCTGG GCGTGAGCTA CCTTCCGCGC
CGCTGCCTGG ACCCGCTGGT TTCGGCCGGC ATGCTCGCGG TGATCGACGT GCAGCCGGCG
CTGCCGGTGG TGCGCTACGT GGCCATGCAC AAGGGCGAGC ACCGCAGCGC GCTGACGTCG
TCGATCGTGA TGCTGGCGCA GGAATGCTGC GATTTCACGC GCATGTTCCA GGCGCAGCAG
GACGAAGAGC CTGCAGAATG A
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| Protein sequence | MTFKQLEALY WIAKLGGFAQ AANQLHTSQS AVSKRVHELE LLFDTELFDR SQRTARLTEK
GEEMFVLAAR LLEQRDAAVE QFSKPGVVQR RLRIGVTELT AMTWLPRLVG VIQRHYPKVV
LEPDVDDSLQ LRDKLLADEL DLVIVPDTFA DSRMQSKAIG KVQSAWMCKP GVVAATGTVR
LHELARHRML VQGKNSGTGR AYDAWMKDQG VQPADTIVVS NLVALTGLTV SGLGVSYLPR
RCLDPLVSAG MLAVIDVQPA LPVVRYVAMH KGEHRSALTS SIVMLAQECC DFTRMFQAQQ
DEEPAE
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