| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3930 |
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| Symbol | |
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| ID | 7970359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4169922 |
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| End bp | 4170833 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794516 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002945810 |
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| Protein GI | 239816900 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC GCAGTTCCAC GCCCACCCTC ACGGCCGACG CCCATGCGGT CGTGCATCGC
TTCGCCGACC TCGACGGGAT GCAGGTCTTC TACCGCGAAG CCGGCCCGCG CGACGCGCCG
GTGCTGCTGC TGCCGCACGG CTACCCGTGC TCGTCGTTCC AGTACCGCCG GCTCATGCCT
TTGCTGGCGG ACCGGTGGCG CCTGGTGGCG CCGGACTACC CGGGCTTCGG CCTCAGCGAC
ACGCCGCCCG CCGAGGCCTT CGGCTTCGAC TTCGATGCCT ATGCGGGCTT TCTCGAAGCC
TTCTGCCGCA AGCTGGGCCT TGATCGCTAT GCGCTCTACC TGCACGACTA CGGTTCGCAG
ATCGGCCTGC GCCTGGCCAT CCGGCATCCG GAGCGCGTGG CCGCGGTGAT CATCCAGAAC
GGCGACATCT ACGAAGACAC GCTCGGCCCC AAGTACCGCG CCATCCAGGC CTTCTGGCGC
GATCCGTCGG CCAGCAACCG CGCGGTGCTC GAGAAGGCGG TGAACGAAGG AGGCTTTCGC
GCCGAGTTCG TCGGCGAGGT TCCCGAGGCC CAGGCCGCGC AGATTCCACC CGATCTGTGG
AAGCTGCACT GGCCGCTGAT GAACACGCCG CAGCGCCGGG AACTCGCGCG CCAGCTGATG
GAAGGCCTGA AAGAAAACCT CGAATGGTTT CCACGCTACC AGGCCTTCCT GCGCGAGCAC
CAACCGCCCG CGCTCATCGT CTGGGGGCCG AACGACGGTT ACATGCCCGA GGCCTCCGCG
CGCGCCTACC TGCGCGACCT GCCGAAGGCC GAGCTGGTGC TGACCGACGG CGGCCACTGG
CTGCTCGAGA CGCACCTCGC GCAGGTGGTG CCGGTCATCC GGCGCTTCCT GTCCGCGGCC
CACTCGCGCT GA
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| Protein sequence | MTERSSTPTL TADAHAVVHR FADLDGMQVF YREAGPRDAP VLLLPHGYPC SSFQYRRLMP
LLADRWRLVA PDYPGFGLSD TPPAEAFGFD FDAYAGFLEA FCRKLGLDRY ALYLHDYGSQ
IGLRLAIRHP ERVAAVIIQN GDIYEDTLGP KYRAIQAFWR DPSASNRAVL EKAVNEGGFR
AEFVGEVPEA QAAQIPPDLW KLHWPLMNTP QRRELARQLM EGLKENLEWF PRYQAFLREH
QPPALIVWGP NDGYMPEASA RAYLRDLPKA ELVLTDGGHW LLETHLAQVV PVIRRFLSAA
HSR
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