| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3927 |
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| Symbol | |
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| ID | 7970356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4165831 |
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| End bp | 4166802 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794513 |
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| Product | urate catabolism protein |
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| Protein accession | YP_002945807 |
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| Protein GI | 239816897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.383591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCT ACGACACCAC CCTGCCCTAC CCGCGCGACC TCGTCGGCTA CGGCCGCAAT
CCGCCCCATG CCCAGTGGCC CGGCGGCGCG CGCATCGCGG TGCAGTTCGT CCTCAACTAC
GAAGAGGGCG GCGAGAACGC CACGCTGCAC GGCGACGCGG GCTCCGAGCA GTTCCTTTCC
GAGATGTTCA ATCCGGCGAG CTTTCCGGAC CGGCACATCA GCATGGAAGG CATCTACGAA
TACGGCTCGC GCGCCGGCGT CTGGCGCATC CTGCGCGAGT TCGAGAAGCG CGGCCTGCCG
CTCACCGTGT TCGGCGTGGG CATGGCGCTC GCGCGCTACC CCGAGCTGGC CGCGGCCTTC
AAGGAACTGG GCCACGAGAT CGCCTGCCAC GGCTGGCGCT GGATCCACTA CCAGAACCTC
GACGAGGCCA CCGAGCGCGA GCACATGCGC CTGGGCATGG AAGCGATCGA AAAGCTCACC
GGCGAGCGCG CCCTGGGCTG GTACACCGGC CGCGACAGCC CGCGCACGCG CCGCCTCGTG
GCCGACTACG GCGGCTTCGA GTACGACAGC GACTACTACG GCGACGACCT GCCCTTCTGG
ATGAAGGTGC AGAAGACCGA CGGCAGCGTG GTGCCGCAGC TCATCGTGCC CTACACGCTC
GACTGCAACG ACATGCGCTT TGCGCTGCCG CAGGGCTACT CGCACGCCGA CCCGTTCTTC
CAGTACATGA AGGACAGCTT CGACGCGCTC TATGCCGAAG GCGATCCGCA GGGCGACAAC
AGCCCCAAGA TGATGAGCAT CGGCATGCAC TGCCGCCTGC TCGGGCGGCC CGGCCGCATC
ACCGCGCTGC AGCGCTTTCT CGATCACATC GGCCAGCACG AGGACGTGTG GGTCTGCCGG
CGCGTGGACA TCGCGCGCCA CTGGAAGCAG GCCCATCCTT ACGAAGCGGC CGCCACCGGA
GACCCGTCAT GA
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| Protein sequence | MTVYDTTLPY PRDLVGYGRN PPHAQWPGGA RIAVQFVLNY EEGGENATLH GDAGSEQFLS
EMFNPASFPD RHISMEGIYE YGSRAGVWRI LREFEKRGLP LTVFGVGMAL ARYPELAAAF
KELGHEIACH GWRWIHYQNL DEATEREHMR LGMEAIEKLT GERALGWYTG RDSPRTRRLV
ADYGGFEYDS DYYGDDLPFW MKVQKTDGSV VPQLIVPYTL DCNDMRFALP QGYSHADPFF
QYMKDSFDAL YAEGDPQGDN SPKMMSIGMH CRLLGRPGRI TALQRFLDHI GQHEDVWVCR
RVDIARHWKQ AHPYEAAATG DPS
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