| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3923 |
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| Symbol | |
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| ID | 7970352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4163336 |
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| End bp | 4164142 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794509 |
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| Product | xanthine dehydrogenase accessory protein XdhC |
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| Protein accession | YP_002945803 |
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| Protein GI | 239816893 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.113867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCT TGGTCGATCA GCTGCTGGCG CGCCTGGCCC GCGAAGACGC GGTGCTGGTG
CGCGTCGAAT CCACGCAGGG CTCGGCGCCG CGCGAGGCGG GCACCTGGAT GGCGGTGTGG
GCCGAAGGGC TCACGGGCAC CATCGGCGGC GGCCAGCTCG AATTCCAGGC CACGCGGGAA
GCGCGCGAAC TGCTCGCGGG GCGGCGCGCC ATCGACGGCA TCGAGCGCTA CCCGCTCGGC
CCGAGCCTGG GCCAGTGCTG CGGCGGCGTG ATGTTTCTCT CTTACCGCCG CATCACGGCG
GCCGATGCGC CGGCCTTGCA GCGTGAACTG GTTGCACAGC TCCAGCCCGT GGCGCTGTTC
GGCGGCGGGC ATGTGGGCGC TGCGCTTGCG CGTCTGCTGG CCAGCCTGCC CTTTTCGGTG
CGCTGGATCG ACAGCCGCGA CGGCGTGTTT CCCGGTGCGC TGCCGGCGCA GATCGAGACC
GAGCATTCCG AGCCCGTGCA GGACGCCGTG GCCGCGCTCG CGCCGGGCAG CCGCGTGCTG
ATCATGAGCT TCAGCCACGC CGAAGACCTG GACATCGTCA TTGCCTGCCT CAAGCGCCTG
CGCACGCATG GCGACCTGCC CTACATCGGC CTGATCGGCA GCAAGACCAA GTGGGCCACC
TTCAGCCACC GGCTCGAGGC GCGCGGCTTC AGGCCCGAGG AACTGGCCCG CATCACCTGC
CCGATCGGCG TGCCCGGCAT CACCGGCAAG GAGCCCGAGG TGATCGCGGT GGCAGTGGCG
GCACAGTTGT TGCAATCGCT GGGCTGA
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| Protein sequence | MNGLVDQLLA RLAREDAVLV RVESTQGSAP REAGTWMAVW AEGLTGTIGG GQLEFQATRE
ARELLAGRRA IDGIERYPLG PSLGQCCGGV MFLSYRRITA ADAPALQREL VAQLQPVALF
GGGHVGAALA RLLASLPFSV RWIDSRDGVF PGALPAQIET EHSEPVQDAV AALAPGSRVL
IMSFSHAEDL DIVIACLKRL RTHGDLPYIG LIGSKTKWAT FSHRLEARGF RPEELARITC
PIGVPGITGK EPEVIAVAVA AQLLQSLG
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