Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3920 |
Symbol | |
ID | 7970349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4158866 |
End bp | 4160308 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794506 |
Product | Aldehyde dehydrogenase (NAD(+)) |
Protein accession | YP_002945800 |
Protein GI | 239816890 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.179943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCA CCTACACCGA CACCCGCCTG CTGATCGACA ACGAATGGGT CGACGCCACC GGCGGCAAGA CGCTGGACGT CGTGAACCCC GCCACCGGCA AGGCCATCGG CAAGGTGGCG CATGCCAGCA TCGCCGATCT CGACCGCGCC CTGGCCGCCG CCCAGCGCGG CTTCGAAAAG TGGCGCAACA CGCCCGCCAA CGAGCGCGCC GCCGTCATGC GCCGCGCCGC CGGCCTGATC CGCGAACGCG CCCCTGAAAT CGCCAAGCTG CTCACGCAGG AGCAGGGCAA GCCGCTGGCC GAAGCCAAGG GCGAAACGCT GGCCGCCGCC GACATCATCG AGTGGTTCGC CGACGAAGGC CGCCGCGTCT ACGGCCGCAT CGTGCCCTCG CGCAACCTGG CTGCGCAGCA ATTGGTGATC AAGGAGCCGC TGGGCCCGGT CGCCGCGTTC ACGCCCTGGA ACTTCCCCAT CAACCAGATC GTGCGCAAGC TCGGCGCCGC ACTGGCCACC GGCTGCTCGT TCCTGGTGAA GGCACCCGAA GAAACTCCGG CTTCGCCGGC CGCGCTGCTG CAGGCTTTCG TCGATGCCGG CATTCCGCCC GGCACCGTGG GCCTGGTGTT CGGCAACCCG GCCGAAATCT CGAACTACCT GATCTCGCAT CCGATCATCC GCAAGGTCAC CTTCACGGGC TCCACCCCGG TCGGCAAACA GCTGGCCGCG CTGGCCGGCT CGCACATGAA GCGCGTCACC ATGGAGCTGG GCGGCCACGC GCCAGTCATC GTGGCCGAGG ACGCCGACGT GGCCCTGGCC GTGAAGGCCG CGGGTGCCGC CAAGTTCCGC AATGCGGGCC AGGTCTGCAT TTCGCCGACC CGCTTCCTGG TGCACAACAG CCTGCGCGAG GAATTCGCCC GCACGCTGGT CAAGTACACC GAAGGCCTGA AGCTCGGCGA CGGCCTGGCC GAAGGCACGA CCCTGGGCCC GCTCGCCAAC GCGCGCCGCC TCACGGCCAT GGCCCATGTG CTGGACGATG CGCGCAAGAA GGGCGCCACC GTGGCGGCCG GCGGCGAACG CGTCGGCGAC ACCGGCAACT TCTTCGCGCC CACCGTGCTG ACCGACGTGC CGCTCGATGC CGACGTGTTC AACAACGAGC CCTTCGGCCC GATCGCGGCG ATCCGCGGCT TCGATACGCT GGAAGAAGCG ATTGCCGAAG CCAACCGCCT GCCGTTCGGC CTGGCCGGCT ATGCCTTCAC CCGGTCGATC AAGAACGCGC ACCTGCTGAG CCAGAAGCTC GAGCTCGGCA TGCTGTGGAT CAACCAACCC GCCGCGCCCT CGCCCGAAAT GCCGTTCGGC GGCGTGAAGG ATTCGGGCTA CGGCTCGGAA GGCGGCCCGG AGGCGCTCGA GGCTTACCTG AACACCAAGG CTGTTTCGAT CATGAGCGTG TAA
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Protein sequence | MTATYTDTRL LIDNEWVDAT GGKTLDVVNP ATGKAIGKVA HASIADLDRA LAAAQRGFEK WRNTPANERA AVMRRAAGLI RERAPEIAKL LTQEQGKPLA EAKGETLAAA DIIEWFADEG RRVYGRIVPS RNLAAQQLVI KEPLGPVAAF TPWNFPINQI VRKLGAALAT GCSFLVKAPE ETPASPAALL QAFVDAGIPP GTVGLVFGNP AEISNYLISH PIIRKVTFTG STPVGKQLAA LAGSHMKRVT MELGGHAPVI VAEDADVALA VKAAGAAKFR NAGQVCISPT RFLVHNSLRE EFARTLVKYT EGLKLGDGLA EGTTLGPLAN ARRLTAMAHV LDDARKKGAT VAAGGERVGD TGNFFAPTVL TDVPLDADVF NNEPFGPIAA IRGFDTLEEA IAEANRLPFG LAGYAFTRSI KNAHLLSQKL ELGMLWINQP AAPSPEMPFG GVKDSGYGSE GGPEALEAYL NTKAVSIMSV
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