| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3910 |
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| Symbol | |
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| ID | 7970339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4146419 |
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| End bp | 4148578 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794496 |
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| Product | Indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_002945790 |
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| Protein GI | 239816880 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTT CATTCAGCAA GGAAGTCGAG CTGCTGCGCC TGGGCGCCGG CGACACCTTC
CACGGCGAGG GCATCCTCGC CATCACCAAG GGCCTGCTGC AGTCGGGTGT GGCCTACGTG
GGCGGCTACC AGGGCGCGCC GGTGTCGCAC CTGCTCGACG TCATGGTGCA GGGCAAGGCC
TACATGGACG AGCTCGGCGT GCATGTGGAA GCCTGCTCCA ACGAAGCCTC GGCCGCGGCC
ATGCTCGGCG CCTCCATCCA CTATCCGCTG CGCGGCGCCG TCACCTGGAA GTCGATAGTC
GGCACCAACG TGGCGGCCGA TGCGCTTTCC AACCTGTCGT CGCCCGGCGT GACCGGCGGC
GTGCTGGTGG TGGTGGGCGA GGACTACGGC GAAGGCGCCA GCGTGATCCA GGAGCGCACG
CATGCCTATG CGCTCAAGTC GAGCATGTGC CTGCTCGATC CGCGGCCCGA CCTGGGCGTG
ATGGTGCGCA TGGTGGAAGA AGGCTTCCGT CTTTCGGAAG CCTCCAACAT GCCCTGCCTG
ATGGAGCTGC GCATCCGCAC CTGCCACGTG CGCGGCAGCT TCGAGTGCAA GGACAACATC
GCGCCCGCGG TGTCGACCCG CGCGCTGATG AGCGAGCCCG CGGGCTTCGA CTACATGCGG
CTCGCGCATC CGCCCGTCAC CTTCCGCCAT GAAAAACTCA AGGGCGACGA GCGCATTCCG
GCCGCGCGGC GCTACATCGT GGAGCACCGG CTCAACGAGC TGGTGCCGGG CGGCCGGCAT
GCCGACCTGG GCATCGTGGT GCAGGGCGGG CTCTACAACG CGCTCATCCG CAGCCTGCAG
CAGCAGGGCC TGGCCGATGC CTTCGGCGAG ACCGACATCC CGATCCTGGT GCTCAACGTG
ACCTACCCGC TGGTGCCCGA GCAGGTCGCC GACTTCTGCC TGGGCAAGCG CGCAGTGCTG
GTGGTGGAGG AAGGCCAGCC CGAATACATC GAGCAGGACA TCGCCACCCT CCTGCGCCGG
CGCGACATCC AGACGCCGCT GCACGGCAAG GACATGCTGC CTTCGGCCGG CGAATACGGC
GTCGAGGTGC TCGCGGGCGG CCTGGGCGCC TTCGCCGCGA AGTACATCGA GAGCAGCGAG
GCTTCGTCCT CCGCAAAGGC CTGGCTGGCC GGCAACCGCG AGCGCCGCGA GGCGGTCGCG
CGCCAGCTCG AGACGCTGCT GCCCAACCGG CCGCCGAGCT TCTGCGTCGG CTGCCCCGAG
CGGCCGGTGT TCTCGGCACT CAAGCTCGCG CAGCAGGAGA CCGGGCCGGT GCACATCGCG
GCCGACATCG GCTGCCATGC CTTCGGCACC TTCGAGCCCT TCTCGATGGG GCATTCGATC
CTGGGCTACG GCATGAGCTT GGCAAGCCGC GCGGGCGTGG CGCCCATGAT GAACCGCCGC
ACGCTGTCGA TCATGGGCGA CGGCGGCTTC TGGCACAACG GCCTGCTCAC CGGCGTGCAG
AGCGCGCTCT TCAACGGCGA CGACGCAGTG CTGCTGATCT TCAAGAACGG CTACACCTCG
GCCACCGGCA CGCAGGACAT CATCTCGACG CCCGACGACG AGACGAAGGA GCGCGCCGTC
GACAAGCAGC AGAGCCTGGT CGACAAGAAC CAGACCATCG AGGCCACGCT CACGGGCCTG
GGCGTCAAGT GGATGCGCAC CGTCACCACC TACGAGGTGG AGCGCATGCG CAAGACGCTG
ACCGAGGCGC TCACCAGCGA CTTCAACGGC CTCAAGGTGG TGATTGCCGA GGGCGAATGC
CAGCTCGAGC GGCAGCGCCG CATCAAGCCC TGGATTGCCG GCCTGCTCAA GAAGGGCGAG
CGCGTGGTGC GCGTGAAGTA CGGCGTCGAC GAGGACGTGT GCAACGGCGA CCACGCCTGC
ATCCGCCTGT CGGGCTGCCC CACGCTCACG CTCAAGGACA ACCCCGATCC GCTCAAGGTC
GACCCCGTGG CCACCGTGAT CGACGGCTGC GTGGGCTGCG GCCTGTGCGG CGAGAACGCG
CATGCGGCCA CGCTGTGCCC GAGCTTCTAC CGCGCCGAGG TGGTGCAGAA CCCCAAGTGG
CACGAGCGCC TGCTGCACGC GCTGCGCGGC GCCGTGGTGC GCGTGCTGCA ACCCGCATGA
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| Protein sequence | MEVSFSKEVE LLRLGAGDTF HGEGILAITK GLLQSGVAYV GGYQGAPVSH LLDVMVQGKA
YMDELGVHVE ACSNEASAAA MLGASIHYPL RGAVTWKSIV GTNVAADALS NLSSPGVTGG
VLVVVGEDYG EGASVIQERT HAYALKSSMC LLDPRPDLGV MVRMVEEGFR LSEASNMPCL
MELRIRTCHV RGSFECKDNI APAVSTRALM SEPAGFDYMR LAHPPVTFRH EKLKGDERIP
AARRYIVEHR LNELVPGGRH ADLGIVVQGG LYNALIRSLQ QQGLADAFGE TDIPILVLNV
TYPLVPEQVA DFCLGKRAVL VVEEGQPEYI EQDIATLLRR RDIQTPLHGK DMLPSAGEYG
VEVLAGGLGA FAAKYIESSE ASSSAKAWLA GNRERREAVA RQLETLLPNR PPSFCVGCPE
RPVFSALKLA QQETGPVHIA ADIGCHAFGT FEPFSMGHSI LGYGMSLASR AGVAPMMNRR
TLSIMGDGGF WHNGLLTGVQ SALFNGDDAV LLIFKNGYTS ATGTQDIIST PDDETKERAV
DKQQSLVDKN QTIEATLTGL GVKWMRTVTT YEVERMRKTL TEALTSDFNG LKVVIAEGEC
QLERQRRIKP WIAGLLKKGE RVVRVKYGVD EDVCNGDHAC IRLSGCPTLT LKDNPDPLKV
DPVATVIDGC VGCGLCGENA HAATLCPSFY RAEVVQNPKW HERLLHALRG AVVRVLQPA
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