| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3908 |
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| Symbol | |
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| ID | 7970337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4144075 |
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| End bp | 4145346 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794494 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_002945788 |
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| Protein GI | 239816878 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGAT CGGGCCACAT GAAGAAACGT ATTCCGTCGT TCCTGCGCCA CGTGGGGCCT
GGCGTCGTCA CCGGTGCGGC CGACGACGAC CCCTCCGGCA TCGCCACCTA CACCCAGGCC
GGCGCCCAGT TCGGCACCGG CCTGCTCTGG ACGGTGTTCC TGTCGCTGCC GTTCATGGTG
GCGATCCAGC TGGTGTCGGC GCGCATCGGG CGGGTCACGG GCAAGGGCGT GGCGGCCAAC
CTGCGCGAGC ACATGCCGCG CGGCTTCCTG TTCGCCCTGG TGTCGCTGCT GGTGGTGGCC
AACACCATCA ACATCGCGGC CGACATCGCG GCCATGGGCG AGGCGCTGCA GCTGGTGGTG
GGCGGCGGCG CGCACTTCCA TTCGCTGATG TTCGGCGTGG TCACGGTGCT GCTGCAGGTG
TTCGTGCCCT ACCGCAAGCT GGCCCACATT CTCAAGTGGC TGACGCTCAC GCTGTTTGCC
TACGTGGCCG CGGTGTTCGC GGTGCAGGTG GAATGGGGCC GCGTGCTGCA CGACCTCGTC
GTGCCCCGGC TACAGTGGAA CGGCAGCTAC TGGATGATGA TCGTGGCGCT GCTGGGCACC
ACCATCTCGC CGTACCTGTT CTTCTGGCAG GCCTCGCAGG AGGTCGAGGA GCTCCGGCTC
AGGGGCGGGC GGCGCGGCAC CGACCAGGAG GTGTGGCGCG ACCTGCGGCG CGTGCGGCTC
GACACCTGGC TGGGCATGAC CTTCTCGAAC CTGATCGCCT TCTTCGTGAT GGTGGTGGGC
GCGGCGGTGC TGTTCGCGGC GGGGGTGCAC GACGTGTCTT CGGCGGCGCA GGCGGCCGAG
GCGCTGCGGC CGCTGGCGGG CGACTTCGCG TTCTGGCTCT TCGCGGGCGG CATCATCGCC
ACGGGTTTGC TTGCGGTGCC CGTGCTGGCC TCGTCGGCTG CCTATGCGGT GGCCGAGGCC
TTCGGCTGGG AAGAAGGGCT GGAGCGGCAC TGGCGCGAAG CCAAGGAGTT CTACGGGATC
ATCGCGGTGG CCACGCTGGT GGGCACCGCG CTCGACTTCA CGCCGATCGA TCCGATGAAG
GCGCTGTACT GGAGCGCCGT GATCAACGGC GTGGTCGCCG TGCCGATCAT GGCCGCGATG
ATGGTGCTGG TGTCGCGCGA GAAGGTGATG GGCCTGTTCA CCTCGGGGCG CCGCACGCGC
TGGCTCGGGT GGGGCGGCAC GGCCCTCATG GGCTTCGCGG CGCTGATGAT GGGCTGGGAC
ATGGTGCGCT GA
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| Protein sequence | MPRSGHMKKR IPSFLRHVGP GVVTGAADDD PSGIATYTQA GAQFGTGLLW TVFLSLPFMV
AIQLVSARIG RVTGKGVAAN LREHMPRGFL FALVSLLVVA NTINIAADIA AMGEALQLVV
GGGAHFHSLM FGVVTVLLQV FVPYRKLAHI LKWLTLTLFA YVAAVFAVQV EWGRVLHDLV
VPRLQWNGSY WMMIVALLGT TISPYLFFWQ ASQEVEELRL RGGRRGTDQE VWRDLRRVRL
DTWLGMTFSN LIAFFVMVVG AAVLFAAGVH DVSSAAQAAE ALRPLAGDFA FWLFAGGIIA
TGLLAVPVLA SSAAYAVAEA FGWEEGLERH WREAKEFYGI IAVATLVGTA LDFTPIDPMK
ALYWSAVING VVAVPIMAAM MVLVSREKVM GLFTSGRRTR WLGWGGTALM GFAALMMGWD
MVR
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