| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3906 |
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| Symbol | |
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| ID | 7970335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4139798 |
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| End bp | 4142248 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794492 |
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| Product | xanthine dehydrogenase, molybdopterin binding subunit |
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| Protein accession | YP_002945786 |
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| Protein GI | 239816876 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC CCATCGACGC CCGCCTGCTG CAGCCCGCCG AGGCCTTTGC CGACTACCTG
AAGAACACCG CCGCGCGCAT CGACCCCGTG GCCGAGGCGA TCGCGCACGA CCTTGGCGCG
CGTGTCGGCA TCAGCCGGCC GCACGAATCG GCGCACCTGC ACGTGGCCGG CGAAGCGACC
TACATCGACG ACATTCCCGA AATCACCGGC ACGCTGCATT GCGCGCTGGG CCTGTCGCCC
GCAGCGAACG GCCGTGTCAC GGCGCTGTCG CTCGACGCGA TCCGCACGAT GCCCGGCGTG
GTCGCGGTGC TCACGGCCGA CGACATTCCG GGCACCAACG ACTGCGGCTC GATCGTCCAC
GACGATCCGA TCCTCCTGCC CGTGAACGAG GGCGGCGAGA TCCGCTACCT CGGCCAGCCG
GTGTTCGCGG TGATCGCCGA AACGCGCGAG GCCGCGCGCC GCGCCGCTTC CAAGGCCAAG
GAGGCGATGA CCATCGAGGC CGAGCCGCCC GTGCTCACGC CGCAGGAGGC GCATGCGCGC
GGCCAGTACG TGGTGCCACC GATGCACATC GTGCGCAGCG GCGGCAGCGC CAACGAAGGC
GACGAAGCCG CCGTGCGCGC CGCCATCGCC AAGGCGCCGC ACCGCCACAA GTCCACGCTC
GACGTCGGCG GGCAGGAGCA GTTCTACCTC GAGGGCCAGA TCAGCTACGC CATTCCGAAG
GAAGGCGGCG CGCTGCACAT CCATTGCTCG ACGCAGCACC CGAGCGAAAT GCAGCACCTG
GTGGCGCATG CGCTGCACCT GCAGTCGAAC GAAGTGCATG TGGAATGCCG GCGCATGGGC
GGCGGCTTTG GCGGCAAGGA ATCGCAGTCG GCGCTGTTCG CCTGCGTGGC GGCCATCGCG
GCGCGGCAGC TGCAGCGCCC GGTCAAGCTC AGGCTCGACC GCGACGACGA CTTCATGATC
ACCGGCCGCC GCCATTGCTT CTGGTACGAG TACGAGGTGG GCTACGACGA CGAGGGCCGC
ATCCTCGGCG CGGAGATCAC CATGGTGTCG CGCGCCGGCC ACTCGGCCGA CCTCTCGGGC
CCGGTGATGA CGCGCGCGCT GTGCCACTTC GACAACGCCT ACTGGCTGCC CAACGTGGCC
ATGCACGGCT ACTCGGGCAA GACCAACACG CAGAGCAACA CCGCGTTCCG GGGCTTCGGC
GGGCCGCAGG GCGCGATTGC CGTCGAGAAC ATCATGGACT CGGTGGCGCG CGCGCTGGGC
CGCGATCCGC TCGACGTGCG GCGCGTCAAC TTCTACGGCA CGACGCAGAA CAACGTCACG
CCCTACCGCC AGACCGTGAC CGACAACATC GTCCACGAAC TGGTGGCCGA CCTCGAAGCC
AGCAGCGGCT ACCGCGCGCG GCGCGAAGAG ATCGCGGCCT TCAACGCAAA GAGCGTGGTG
CTCAAGCGCG GCCTCGCGCT CGCGCCGCTC AAGTTCGGCA TCTCGTTCAA CGTCAAGCAT
TTCAACCAGG CGGGCGCGCT GGTGCATGTG TACACCGACG GCTCGATCCT CGTGAACCAC
GGCGGAACCG AGATGGGGCA GGGCCTCAAC ACCAAGGTGG CGCAAGTGGT GGCGCACGAG
CTGGGCGTGA GCTTCGAACG CGTGCGCGTG ACGGCAACCG ACACCACCAA GGTGGCCAAC
ACCTCGGCCA CGGCCGCATC GACCGGCGCC GACCTGAACG GCAAGGCCGC ACAGGACGCC
GCTCGCCAGA TCCGCGAGCG GCTGGCCGAG AGCGCCGCCG AGCGCCATGG CGGCAAGGCG
AGCGAGGTGC GCTTTGCCAA CGACAAGGTC GAGGTCAACG GCCGCTCGCT GGCCTTCAGC
ACCGTGGTGG GCGAGGCGTA TCTCGACCGC AAGCAGCTCT GGTCCGACGG CTTCTATGCC
ACGCCGGGCC TCAGCTGGGA CAAGGACAGG ATGCAGGGCC GCCCGTTCTA CTACTACGCC
TACGGCGCGG CGGTGAGCGA GGTGATCGTC GACACGCTCA CCGGCGAATG GAAGCTCTTG
CGCGCCGACA TCCTGCACGA TGCGGGCAAG TCGCTGAACC CGGCCGTGGA CATCGGCCAG
GTCGAGGGCG CCTTCATCCA GGGCATGGGC TGGCTCACCA CCGAGGAGCT GGTGTGGCAT
CCGCAAAGCG GCAAGCTCAC CACGCACGCG CCCAGCACCT ACAAGATCCC GACCGCCAAC
GACTGCCCGC CCGTCTTCAA CGTGCGCCTG TTCGAAGGCC AGAACTTCGA GGACTCGATC
CACCGCAGCA AGGCCGTGGG CGAACCGCCG CTCTTGCTGC CGTTCTCGGT GTTCTTCGCG
ATCCGCGACG CGGTGTCGGC CGCGGGTGGG CACAAGGTCG ATCCGCCGCT GAAGGCGCCG
GCCACGAGCG AATCGATCCT TCGCGCCATC ACGGCCGTGC AGTCCGCCTA G
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| Protein sequence | MNKPIDARLL QPAEAFADYL KNTAARIDPV AEAIAHDLGA RVGISRPHES AHLHVAGEAT
YIDDIPEITG TLHCALGLSP AANGRVTALS LDAIRTMPGV VAVLTADDIP GTNDCGSIVH
DDPILLPVNE GGEIRYLGQP VFAVIAETRE AARRAASKAK EAMTIEAEPP VLTPQEAHAR
GQYVVPPMHI VRSGGSANEG DEAAVRAAIA KAPHRHKSTL DVGGQEQFYL EGQISYAIPK
EGGALHIHCS TQHPSEMQHL VAHALHLQSN EVHVECRRMG GGFGGKESQS ALFACVAAIA
ARQLQRPVKL RLDRDDDFMI TGRRHCFWYE YEVGYDDEGR ILGAEITMVS RAGHSADLSG
PVMTRALCHF DNAYWLPNVA MHGYSGKTNT QSNTAFRGFG GPQGAIAVEN IMDSVARALG
RDPLDVRRVN FYGTTQNNVT PYRQTVTDNI VHELVADLEA SSGYRARREE IAAFNAKSVV
LKRGLALAPL KFGISFNVKH FNQAGALVHV YTDGSILVNH GGTEMGQGLN TKVAQVVAHE
LGVSFERVRV TATDTTKVAN TSATAASTGA DLNGKAAQDA ARQIRERLAE SAAERHGGKA
SEVRFANDKV EVNGRSLAFS TVVGEAYLDR KQLWSDGFYA TPGLSWDKDR MQGRPFYYYA
YGAAVSEVIV DTLTGEWKLL RADILHDAGK SLNPAVDIGQ VEGAFIQGMG WLTTEELVWH
PQSGKLTTHA PSTYKIPTAN DCPPVFNVRL FEGQNFEDSI HRSKAVGEPP LLLPFSVFFA
IRDAVSAAGG HKVDPPLKAP ATSESILRAI TAVQSA
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