| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3904 |
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| Symbol | |
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| ID | 7970333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4137243 |
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| End bp | 4138604 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794490 |
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| Product | Xanthine/uracil/vitamin C permease |
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| Protein accession | YP_002945784 |
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| Protein GI | 239816874 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2252] Permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCAAGG TCACCGATCC CCACGCCTCG GGGACAGCCG CGCGCAGCGC GCCGCAGGGC
GCGAACTGGC TTGAACGCAT GTTCAAGCTG ACCGAGCACA ACACCACCGT GCGCACCGAA
GTCATCGCAG GGCTCACCAC CTTCCTGACG ATGGCCTACA TCATCTTCGT GAACCCCTCG
ATCCTCGGCG ATGCGGGCAT GCCCAAGGGC GCGGTCTTCG TGGCCACCTG CCTGATCGCG
GCGCTGGGCA CGCTGATCAT GGGCCTGTAT GCCAACTACC CGATCGCGAT GGCGCCGGGC
ATGGGGCTGA ACGCCTACTT CGCCTACGTG GTGGTGCTGG GCATGGGCTA CACGTGGCAG
GTGGCGCTGG GCGCGGTGTT CATCTCGGGG ACGCTGTTCC TGATCGTCAC GGTCACGGGG
CTGCGGGAGC TGTTCATACA GGGCATACCG CAGTCGCTGC GAACGGCGAT CACCGTGGGC
ATCGGCATGT TCCTGGCGCT CATCGCGCTC AAGAGCGCGG GCGTGGTCGC GGCATCGCCG
GCCACCTTCG TCACGCTGGG CGACCTGCAC TCGGCGCCGG TGGTGCTGGC GACGCTGGGC
TTCCTCGTGA TCGTGACGCT CGACCGGCTC AAGGTGCGCG GCGCCATCCT CATCGGCATC
ATGCTGGTGA CGGTGCTGTC GTTCTTCTTC GGCGGCAACA AGTTCCATGG CGTGTTCGAT
GCGCCGCCGT CCATTGCGCC CACCTTCATG CAGCTCGACA TCCTGGGCGC GCTCAAGGGC
GGCATCCTGA ATGTGGTGCT GGTGTTCTTC CTGGTCGAGA TGTTCGACGC CACCGGCACG
CTGATGGGCG TGGCCAAGCG CGCGGGCCTC CTGGTGCCCG GCAAGATGGA GCGCATGAAC
AAGGCGCTCC TGGCCGACAG CGGCGCGATC TTCGCGGGCT CGCTGCTCGG CACCTCGAGC
ACCACGGCCT ACGTGGAAAG CGCGGCCGGC GTGCAGGCCG GCGGGCGCAC CGGCCTCACG
GCGGTGGTGG TGGCGGTGCT GTTCCTCGCC TGCCTGATGA TCTCGCCGCT CGCGGGATCG
GTGCCGGCCT ATGCCACCGC CCCGGCGCTG CTCTTCGTGG GCTGCCTGAT GCTGCGCGAC
CTCGTCGAGC TCGACTGGGA AGACACCACC GAGGTGATCC CCGCGGCCGT GACCGCGCTG
GCCATGCCTT TCACCTACTC GATCGCCAAT GGCCTGGCCT TCGGCTTCAT CACCTACGCG
GTGCTCAAGC TCTGCACCGG CCGGGCACGG GAAGTGCATG CGATGGTCTG GGTGATCGCG
GCGATTTTCC TGTTCAAGTT CGCCTACATC GGCGGACACT GA
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| Protein sequence | MPKVTDPHAS GTAARSAPQG ANWLERMFKL TEHNTTVRTE VIAGLTTFLT MAYIIFVNPS
ILGDAGMPKG AVFVATCLIA ALGTLIMGLY ANYPIAMAPG MGLNAYFAYV VVLGMGYTWQ
VALGAVFISG TLFLIVTVTG LRELFIQGIP QSLRTAITVG IGMFLALIAL KSAGVVAASP
ATFVTLGDLH SAPVVLATLG FLVIVTLDRL KVRGAILIGI MLVTVLSFFF GGNKFHGVFD
APPSIAPTFM QLDILGALKG GILNVVLVFF LVEMFDATGT LMGVAKRAGL LVPGKMERMN
KALLADSGAI FAGSLLGTSS TTAYVESAAG VQAGGRTGLT AVVVAVLFLA CLMISPLAGS
VPAYATAPAL LFVGCLMLRD LVELDWEDTT EVIPAAVTAL AMPFTYSIAN GLAFGFITYA
VLKLCTGRAR EVHAMVWVIA AIFLFKFAYI GGH
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