| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3903 |
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| Symbol | |
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| ID | 7970332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4135607 |
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| End bp | 4137142 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794489 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945783 |
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| Protein GI | 239816873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC CCAGACTCCA GCTCGCGAAC ATCACCAAGC GCTACCCCGC GGTGGTGGCG
AACAGCGACA TCTCGCTGGC CGTGGCGCCC GGCGAGATCC ATGCCGTGCT CGGCGAGAAC
GGCGCCGGCA AATCGACGCT GATGAAGATC ATCTACGGCT CGGTCAAGCC CGACGAAGGC
ACGGTGGTCT TCGACGGCCA GGCCGTCAGC CTGCGCAACC CGCAGCAGGC GAGGGCGCTG
GGCATCAGCA TGGTGTTCCA GCATTTCAGC CTGTTCGACA CGCTCACCGT GGCCGAGAAC
GTGTGGCTGG GCCTGGACAA GTCGCTGCAG CTGGCCGAGG TGGCGCGCAG CATCACGGCC
AAGGCCAGCG AATACGGCCT GGACATCGAT CCCTCGCGGC CGGTGCACAC GCTGTCGGTG
GGCGAGATGC AGCGGGTGGA AATCATCCGC GCGCTGCTCA CCAACCCCAA GCTGCTGATC
CTCGACGAGC CGACCTCGGT GCTCACGCCG CAGGCGGTGG TCAAGCTTTT CAGCGTGCTC
AACAAGCTGG CGTCGGAGGG CTGCAGCATC CTCTACATCA GCCACAAGCT GCACGAGATC
CGCGAACTGT GCACGGCCTG CACCGTGCTG CGCGGCGGCA AGGTCACAGG CGTGTGCAAT
CCGCAGGACG AAAGCAACGA ATCGCTCTCG CGGCTGATGA TCGGCAGCGA GCCGCCGCCG
CTGCAGCACC GGCCGGTGCA CGCGGGCGCG GTGGCGCTGC GCGTGAATGG GCTCACGCTG
GCGCGCGAGG ACCAGTTCGG CGTCGACCTC GACGGCATCT CGTTCGAGGT GCGCGCCGGC
GAGGTGGTCG GCATTGCGGG CGTGTCCGGC AACGGGCAGA AGGAACTGCT CTACACGCTC
TCGGGCGAGG ACGTGCGCGC CGAGTCCGCC ATGGTGCAGG TGTTCGGCAA GCCGGCCGGC
CGGCTGCGGC CGCGTGCGCG GCGCGCAATG GGCCTGCACT TCGTGCCCGA GGAGCGGCTG
GGCCGCGGCG CGGTGCCCAC GCTCGGGCTT GCGCACAACC TGCTGCTCAC GCGCGGCAAT
GCGGTGGGCA AGGGCGGCTG GATCCGCACC GGGGCGCTCG AAAAGCATGC AAAGGCCATC
ATCGAGCGCT TCAACGTCAA GGCCGGCGGG CCGAATGCCG CGGCGCGATC GCTCTCGGGC
GGCAACCTGC AGAAATACAT CGTCGGCCGC GAGATCGACG CCAACCCCAA GCTCTTCATC
GTGTCGCAGC CGACCTGGGG CGTGGACGTG GGCGCGGCCG CGCTGATCCG CGGCGAGATC
CTCGCGCTGC GCGACGCCGG CTGCGCGGTG CTGGTGGTGA GCGAAGAGCT CGACGAGCTG
TTCGACATCA GCGACCGGCT GCACGTGATC GCCAAGGGCC GGCTGTCGCC TTCCGTCGAC
CGCGCGGCCG CCACGCTGCC GCAGATCGGC GAATGGATGA GCGGCCTCTG GGAGAAGAAA
AAGAACAGCA ACATCAAGGA GGCGACCCAT GCTTAA
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| Protein sequence | MTTPRLQLAN ITKRYPAVVA NSDISLAVAP GEIHAVLGEN GAGKSTLMKI IYGSVKPDEG
TVVFDGQAVS LRNPQQARAL GISMVFQHFS LFDTLTVAEN VWLGLDKSLQ LAEVARSITA
KASEYGLDID PSRPVHTLSV GEMQRVEIIR ALLTNPKLLI LDEPTSVLTP QAVVKLFSVL
NKLASEGCSI LYISHKLHEI RELCTACTVL RGGKVTGVCN PQDESNESLS RLMIGSEPPP
LQHRPVHAGA VALRVNGLTL AREDQFGVDL DGISFEVRAG EVVGIAGVSG NGQKELLYTL
SGEDVRAESA MVQVFGKPAG RLRPRARRAM GLHFVPEERL GRGAVPTLGL AHNLLLTRGN
AVGKGGWIRT GALEKHAKAI IERFNVKAGG PNAAARSLSG GNLQKYIVGR EIDANPKLFI
VSQPTWGVDV GAAALIRGEI LALRDAGCAV LVVSEELDEL FDISDRLHVI AKGRLSPSVD
RAAATLPQIG EWMSGLWEKK KNSNIKEATH A
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