| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3898 |
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| Symbol | |
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| ID | 7970327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4130232 |
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| End bp | 4131104 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794484 |
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| Product | Citrate (pro-3S)-lyase |
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| Protein accession | YP_002945778 |
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| Protein GI | 239816868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.107361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGCA AACTCTTCGT TCCCGGCACG CGCCCCGAGC TGTTCGCCAA GGCGCTGGCC
AGCGCGGCGG ACAGCGTCTG TTTCGACCTG GAAGACGCGG TGTCCGAGCC GCGCAAGGGC
GAGGCGCGCG ACGCCGTGCG GCAGCTGCTG CTGCAGGGCG GCGGCACGGC CGCGTCGGGC
AAGACCGTGA TCGTTCGCGT CAACGCGATG GACACGCCGC ATTTCGCGGA GGACGTTGTG
GCCGTGGCGC AGCCCGGCGT GCACCTGATC AACATCCCGA AGCCCGAGAG CGCGGCCCAT
GTGCGCAGCG CGGTCGAGGC GATCGAACGC GCCGAGCGCA CCAACGGCGT GGGCACGCCG
ATCGGCCTGC TGCTGAACAT CGAGGCACCC GCGGCCTTGC GCACCGCCGC CGAGCTTGCG
CTCGCGCATC CGCGCGTGGC GGGCCTGCAA CTGGGCCTGG GCGACCTGTT CGAGCCGCTG
GGCATTGCGC GGCGCGAGCC GGCTGCGATC CAGCAGGCGA TGTTCGCGGT GCGCATGGCC
GCGGGCGAGG CGGGCGTCTA TGCCTACGAC GGCGCGTTCG CGGACATCCG CGACGCCGAC
GGATTCCGCG CCGAAGCCAT GCTCGCGCGC AACCTCGGCT TCCTCGGCAA GACCTGCATC
CACCCGAGCC AGATCGCGAT CGCCAACGAG GTGTTCCGTC CCACCGACGA GGAGATCGCG
CACGCATGCA AGGTGGTCGA GGCCGCCCGC ACGGCCGATG CCGGCGGCGT GGGCGCCTAT
GTGGTGGACG GAAAGATGAT CGACATGCCT TTCGTGATCC GCGCGCGCGC CATCGTTGCG
AGCGCGCGCA GCCTCGGCCT GCTGCCGGGC TGA
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| Protein sequence | MRSKLFVPGT RPELFAKALA SAADSVCFDL EDAVSEPRKG EARDAVRQLL LQGGGTAASG
KTVIVRVNAM DTPHFAEDVV AVAQPGVHLI NIPKPESAAH VRSAVEAIER AERTNGVGTP
IGLLLNIEAP AALRTAAELA LAHPRVAGLQ LGLGDLFEPL GIARREPAAI QQAMFAVRMA
AGEAGVYAYD GAFADIRDAD GFRAEAMLAR NLGFLGKTCI HPSQIAIANE VFRPTDEEIA
HACKVVEAAR TADAGGVGAY VVDGKMIDMP FVIRARAIVA SARSLGLLPG
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