| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3891 |
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| Symbol | |
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| ID | 7970320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4122723 |
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| End bp | 4123907 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794477 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945771 |
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| Protein GI | 239816861 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC CTGACGCCAC TTCCCTTGCA CTGATCGACG ACTGTTCCCA AGCTTCGCTG
CAACTGCTGG AACGCAACCT CACGCCGCAC GGCATCCTGG CCGCCACCCG CACCGAGGCC
GCCGTGGCGC GGCGCTACAC GCGCATCTTC GGGCGCGACG CGGCCATCTG CGTGATGGCC
ATGTGCGGCA GCGCCGTGCC CGCGCTGGAG CAGGGCGCCG TCGCCAGCCT CGACGCGCTG
GCCGCGCAGC AGGCGGCCAA CGGCCAGATT CCCAAGTACG TCGACCCCGA TGGCCAGGAT
GCCGACTTCT GGTACCTGGG CTGCATCGAC GCCACGCTGT GGTGGCTGAT CGCGGTGGAC
CACGTGCGCC GCCACGGCCA GGTCGGCGCC ACGCACTGGC ACGCCGAGGT GCAGCGCGCG
ATCGGCTGGC TGCTGGCGCA GGAGCACCAG CACTTCCGGC TGCTGCAGCA GAACGAGGCC
AGCGACTGGG CCGACATCAT GCCGCGCTCG GGCTATGTGC TCTACACCAA CGCGCTCTGG
TACGAGGTGA AGCGCCGCTT CGCGCTGGAC GATGCCGAGG CGACGCAGCA CCACTTCAAC
CACCTGTTCA ATCCATTCCA GCAGGATCTG CCCGAATACC ACCGCGCCCG GCTGCTGCGG
CACTACGCGC GCCGCGGCCG GACCGACCCG GGCCTGTACC TGAGCTTCGT CAACCTGTCC
TTCGTCGGCA ACGAGGGCGA CGTGTTCGGC AACGTGCTGG CCATCCAGGG CGGGCTGGCC
GATTCGGAGA TGGCGAACCG CATCGTCCGC ACCATTGCCG CGGCGCGCGC CTGCGACCCG
TACCCGGTGC GCGTGGTGCT GCATCCGCTG ACGCGCGAGC ATGCGCTGTG GCGGCCCTAC
ATGGCGCGCC ACCAGCAGAA CGTGGTGCAC CAGTACCACA ACGGCGGCAT CTGGCCATTC
GTGGGCGGCT TCTGGGTGAT GGCGCTGGCT CGCCTCGGGC TGCACGACAT GGCCTGGCCC
GAGCTCGCGC GCCTTGCGCA TGTGAACCAG CTCGGCGGCT GGCGATTTAC CGAGTGGTTC
CACGGCCGCA CGCTGGTGCC GATGGGCATG GCCGGCCAGA GCTGGAACGC CGCGGCCTTT
CTGCTCGCCC GGCGTGCGCT GGAGGGCAGC GGGGCGGCCT GGTGA
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| Protein sequence | MTTPDATSLA LIDDCSQASL QLLERNLTPH GILAATRTEA AVARRYTRIF GRDAAICVMA
MCGSAVPALE QGAVASLDAL AAQQAANGQI PKYVDPDGQD ADFWYLGCID ATLWWLIAVD
HVRRHGQVGA THWHAEVQRA IGWLLAQEHQ HFRLLQQNEA SDWADIMPRS GYVLYTNALW
YEVKRRFALD DAEATQHHFN HLFNPFQQDL PEYHRARLLR HYARRGRTDP GLYLSFVNLS
FVGNEGDVFG NVLAIQGGLA DSEMANRIVR TIAAARACDP YPVRVVLHPL TREHALWRPY
MARHQQNVVH QYHNGGIWPF VGGFWVMALA RLGLHDMAWP ELARLAHVNQ LGGWRFTEWF
HGRTLVPMGM AGQSWNAAAF LLARRALEGS GAAW
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