| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3890 |
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| Symbol | |
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| ID | 7970319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4121685 |
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| End bp | 4122698 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794476 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_002945770 |
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| Protein GI | 239816860 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.171852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGGA TGGTTCGCTT TCACCGCTTC GGCGGCGCCG ATGTTCTGAA GGTCGAACAG
GTTGCGACGC CAGAGCCTGG CGCCGGCGAA GTGCGCATCG CGGTGCAGGC GATCGGCCTG
AATTGGGCCG ACGCGCTGTG GCGCCAGAAC CAGTACATCG AGGACCCGAT CCTGCCGGCC
GGTCTCGGCA ATGAGGCCGC CGGCCTCATC GAAGCAGTGG GCGCGGGTGT CGATGGCCTG
AGCGTGGGCG ACCGCGTCGC GCTGCTGCCC GGAGCCAACC AGGGCTTGTA TCCCACCTAT
GGCGAGCGCA TTCTTTTTCC GGCCTCGCAT GTGGTGCGCT ACCCCGGCAA GCTCTCGGCC
GAGCAGGCCG CCGGTGCCTA CATGGCCTAC CTGACGGGCT ATTTCCCGAT GTTCGAGATG
GCCCGCCTGC AGCGCGGCCA GACGGTGCTG GTGACGGGTG CGTCATCCAG CACGGGCATT
GCGGCGCTGC AGATGGCGCG CGCGGCGGGC CTCCTCGCCA TCGCGACCAC GCGCACGGCG
GCCAAGCGCC AGGCATTGCG GGATGCTGGC GCGGCCCACG TGGTGGTGAC GCAAGACGAA
GACGTGGTGG AGCGCGTCCT GGCGCTGACC GGTGGCCGCG GGGCCGACCT GGTGTACGAC
GGCGTGGGCG GTCCGCAGCT GGAACGGCTC GGCGGCGCCG TCGCACAGCG CGGCTGGTAC
GTGCTGTACG GGCTCTCCGG CGGCGCGGAG TTCAGCTACC CCGTGCTTGC GCAGTTCCGC
AAGAGCTGGC GCTTCCATGT CTACACGGTG CTGGAATTCA CCGGCTCGGC CACCATGGGC
TTGCCGCGCG ACGAAGCTGC GCTAGGCCGT GCGCTGGCCT TCGTCGATGA AGGCCTGACC
AGCGGTGCCC TGCAGATGCG CATCGACCGC CGCTTTGCGC TCGACGAGGT GGTGCAAGCC
CATGAGTATC TCGAACGCGC CGGTCACATC GGCAAGATCG TGCTCACGGT CTGA
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| Protein sequence | MGRMVRFHRF GGADVLKVEQ VATPEPGAGE VRIAVQAIGL NWADALWRQN QYIEDPILPA
GLGNEAAGLI EAVGAGVDGL SVGDRVALLP GANQGLYPTY GERILFPASH VVRYPGKLSA
EQAAGAYMAY LTGYFPMFEM ARLQRGQTVL VTGASSSTGI AALQMARAAG LLAIATTRTA
AKRQALRDAG AAHVVVTQDE DVVERVLALT GGRGADLVYD GVGGPQLERL GGAVAQRGWY
VLYGLSGGAE FSYPVLAQFR KSWRFHVYTV LEFTGSATMG LPRDEAALGR ALAFVDEGLT
SGALQMRIDR RFALDEVVQA HEYLERAGHI GKIVLTV
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