| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3871 |
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| Symbol | |
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| ID | 7969728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4100395 |
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| End bp | 4101504 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794457 |
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| Product | Alkanesulfonate monooxygenase |
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| Protein accession | YP_002945751 |
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| Protein GI | 239816841 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA ACGACGTTGA ATTCATCGGC ATGATCCAGG GCCAGAAGGT CTCGGAGATC
CACGCGGCCA AGGGCCCGGC CATCGACCGC GACTACGTGC GCGCCTTTGC CCAGGCGCAC
GAGAACGCGG GCTTCGACCG CGTGCTGGTG CCGCACCATT CCACCGGCCC CGACGCCACG
CTGACCGTGG CCCATGCCGC ATCGGTCACC GAGCGCATCC ACTTCATGCT TGCGCACCGC
CCGGGCTTCG TGGCGCCCAC GCTCGCGGCG CGCCAGTTCG CCTCGCTCGA CCAGTTCAGC
GGCGGCCGGC TCGCGGTGCA CTACATCTCG GGCGGCTCCG ACGAGGAACA GCGCCGCGAC
GGCGACTGGC TCGGCCATGA CCAGCGCTAT GCGCGCACCG ACGAATACCT CGACGTGCTG
CACAAGGTGT GGACCGCCGA CAAGCCCTTC GACCATGAAG GCGCGCACTA CCGCTTCCAG
AACGCTTTCT CCGAAGTGAA GCCGCTGCAG ACGCGCAACG GCAAGCCGCA TGTGCCGGTG
TACTTTGGCG GTGCCTCGGA GGCGGCGATT CCGGTGGCCG GCAAGTACGC CGACGTGTAT
GCGCTGTGGG GCGAGTCGCT CGACCAGGCG CGCGAACTCA CGGCGCGCGT GCGTGCAGAG
GCCGCGAAGC ACGGGCGCAG CGTGCGCTTC TCGGTGTCGT TCCGCCCGAT CCTGGCGCAG
ACCGAAGAGG CCGCATGGGC GCGCGCCGAG AACATCCTGG CCGAGACGAA GCGCCTGCGC
GTGGTGCAGG GCTACAACCG CGGCGGGCCG CAGCAGAGCG AAGGTGCGAA GCGCCTGCTC
GCCGCGGCCG AGAAGGGCAC GCGGCTCGAC AAGCGGCTGT GGACGGCGGT GGCGCAGGAG
ATCGGCGGCC GCTCCAACAG CACGGCGCTG GTCGGCACGC CCGAGCAGGT GGCCGATGCG
CTGCTCGACT ACTACGACCT GGGCGTGACC ACCTTCCTGA TCCGCGGCTT CGATCCGCTG
GAAGACGCGG TCGACTATGG ACGCGAGCTG ATTCCGCGTG TGCGCGAGCT GGTGGCGCAG
CGTGCGGCTT CGGCTCGCAA AGCGGCGTGA
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| Protein sequence | MSQNDVEFIG MIQGQKVSEI HAAKGPAIDR DYVRAFAQAH ENAGFDRVLV PHHSTGPDAT
LTVAHAASVT ERIHFMLAHR PGFVAPTLAA RQFASLDQFS GGRLAVHYIS GGSDEEQRRD
GDWLGHDQRY ARTDEYLDVL HKVWTADKPF DHEGAHYRFQ NAFSEVKPLQ TRNGKPHVPV
YFGGASEAAI PVAGKYADVY ALWGESLDQA RELTARVRAE AAKHGRSVRF SVSFRPILAQ
TEEAAWARAE NILAETKRLR VVQGYNRGGP QQSEGAKRLL AAAEKGTRLD KRLWTAVAQE
IGGRSNSTAL VGTPEQVADA LLDYYDLGVT TFLIRGFDPL EDAVDYGREL IPRVRELVAQ
RAASARKAA
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