| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3866 |
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| Symbol | |
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| ID | 7969723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4095347 |
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| End bp | 4096513 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794452 |
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| Product | cytochrome c class I |
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| Protein accession | YP_002945746 |
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| Protein GI | 239816836 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCA CGCCCGAGGC CGATTGGCTC AACCTGCTGA TCGGCCTGCT GCAGGGCGCG
CAGCTGCAAC TGCTGCGCGT GCTCGATGCG CTCGGGCTCG CGCAGCATGT GCACGGCCAG
CCGGCCTGGC CATGGGCGCG GCGGCTGTCC GGCGAGAACC TGCTGATCGA CCTGGGGCAG
GCGCGCAGCC TCGCATGGAC GCTGGTGTTC GTCGCCGTGG CGGCACTGGC GTTGCTGCTC
TCGCTGTTCT GGCGGCGCCC GCGCTACTAC CTGCTGGCGC TGGTGCCGAT GCTGCTGATC
GCCGCGCCCT GGCCCGAGTC GCACGTGGTG CTGGTGCCCG CGACGCCCGC GAGCTTCCAC
GCATCGCCGA CCGGCTTCAC GGCCGCGTCC ATCGCGCAAG GCCGCGTGCT CTACCAGCAG
AACTGCGTGG CCTGCCACGG CGCGGACGGC AAGGGCGAAG GCCCGCTCGC AGCCTCGCTG
GCGGTGTGGC CGCCGGACCT CAGCGGCCCG CTGCTGTGGC GGCGCGCCGA CGGCGACCTG
CTCTGGCGCA TTCTTCATGG CACGCGCGAT GCGCAGCAGC GCGGCCAACC CACCATGCCC
GGCTTTGCCG GAAAGCTCGG CGAGGCCGAT GCCTGGGCGC TGGTCGACTA CATGAAGGCG
CAGGGCGCGG GCCAGAGCCT GCGTGCGCTC GGCAACTGGC CGCAGCCCAT CGGCCTGCCC
GACATGGCGG TGCGCTGCGG TTCGCAGCCG CCGCGCCTGC TCGCGAGCTG GCGCGGGCAG
CGCGTGCGCA TCGTGGCGGG CGATGCAGTG CTCACCGAAG ACCCGCGCCT CGTCACCGTG
CTGCTGCGGC CGCCTTCGAG CACGGTTGCA ACGTCCGCCG ATTGCGTGGC CGACTCCGCC
GCCGCATGGG AGGCGCTGTC GCTCATCGCC GGCACCGATC AGCTCGCCGG CACCCAGCTG
ATTGCCGATC GCGACGGCTG GCTGCGCGCA CGCGGTGCAC CCGGCAAGGC GGGCTGGTCG
GACGACGACC TGCTGTGCCG CAGCGAACGT GCGCCCGTCG CGTGGGGGCA GGGCGCTGCC
GCACTGCCCG CCGATGGCCT GGGCGCGCTG ATCGCCCGCA TGGACGCGCA GCCGGTGCGC
TTCGTCAAGG GCGGCTTCAT CCATTGA
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| Protein sequence | MNSTPEADWL NLLIGLLQGA QLQLLRVLDA LGLAQHVHGQ PAWPWARRLS GENLLIDLGQ
ARSLAWTLVF VAVAALALLL SLFWRRPRYY LLALVPMLLI AAPWPESHVV LVPATPASFH
ASPTGFTAAS IAQGRVLYQQ NCVACHGADG KGEGPLAASL AVWPPDLSGP LLWRRADGDL
LWRILHGTRD AQQRGQPTMP GFAGKLGEAD AWALVDYMKA QGAGQSLRAL GNWPQPIGLP
DMAVRCGSQP PRLLASWRGQ RVRIVAGDAV LTEDPRLVTV LLRPPSSTVA TSADCVADSA
AAWEALSLIA GTDQLAGTQL IADRDGWLRA RGAPGKAGWS DDDLLCRSER APVAWGQGAA
ALPADGLGAL IARMDAQPVR FVKGGFIH
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