Gene Vapar_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3864 
Symbol 
ID7969721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4093167 
End bp4094285 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content61% 
IMG OID644794450 
Producthypothetical protein 
Protein accessionYP_002945744 
Protein GI239816834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.548972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTTC GAGAAAACAG CTACCGGCTG GCCAGGCGCC GCTCCCCCGA AAAAGGCCGC 
ACCCAGATCA ACCTGAAAGG GCAAAAACAC TGGCCGACCC AGCGTTCCGG TGCGCGCGGC
GTCGTGATTC CAAGTCGGGC TGCCTACGCC CAGAACGATG CGTACCTGGA ACTATGCAAC
CCGGGGTGGG ATTTGCAGTG GCGTGCCGGA ATGGGGAATC TCTATGTTGT GCTGCCGGCT
CTCGTGCTGA TATGGATGTG GTACGGATTG GCCGTTCATC CATTGCTATT CAAGCAGATC
ATCTTCTTCT TCGCGATCAG CGATCGTGTT TCGTCAACGG ATCTGTGGCT AGGCTGGCTC
CTGCTATTTC CCCTTGCGTT AGCCAGCGCC TTCATGATCT TCGCGTGGTT CCACTACATG
GGCATGCGCA CCTGCTTCTT TACCTTTGCC CGGGGGCGCA TCCGCTTCAA CCGGCTCACG
CGCAAGGTGT ATGTGCTGCG GCCCGGCTAC CGCGGCGGCA ACGTGGTGCT GGACTGGGAG
CGCCTAGTGG CACTGTTCGA ACCCGAAGGC ACCAGCGCGG GCGCCAAGCA GACCATCAAG
GCGCTCGCGC TTTACCACCC GCCGTTCGAC CGGACCGATC CGAGCGCCAA AGGTGAAGAC
TGCATCTTCG TCGGTCCGGG ACTGTCGGGA CCGCAAGAGG CGGCGTCTCT GTGGGAGTAC
ATCCGCCAGT ACATGGAAGT CGGCCCCACC GTCGATCACG TGCCCGCCGA CGCTTCTTCC
ACCTACAAGG GCATCGCGCG CTATCTGCAT CCGGACTACA CGACCTATTG CGGCAAGCCG
AGCCGACGCC AGTACCAGTT GGAGCAGAAG CCGGGCTTCA TGGAGACGAG CTTCCACATG
ATCAGCCAGA TCACCTGCTC GTGGCCGACA TTCCCGAAGG AATGGCAAAG CGATTCAGGC
ATGGGCGAAC CGGAAGACAA GCCGGTGCAG ACGGGCGCCG TGACGACAGC GCTCGTCTAC
CGGGCACAAG GCAAGCTGAG CAAGGCCGAT GACATCGAGT TCCTGCAGCA CTGGGGAACG
GCCGAGGCGG CGCAAGAAGC GATGTCGCGC AAGGAATGA
 
Protein sequence
MFVRENSYRL ARRRSPEKGR TQINLKGQKH WPTQRSGARG VVIPSRAAYA QNDAYLELCN 
PGWDLQWRAG MGNLYVVLPA LVLIWMWYGL AVHPLLFKQI IFFFAISDRV SSTDLWLGWL
LLFPLALASA FMIFAWFHYM GMRTCFFTFA RGRIRFNRLT RKVYVLRPGY RGGNVVLDWE
RLVALFEPEG TSAGAKQTIK ALALYHPPFD RTDPSAKGED CIFVGPGLSG PQEAASLWEY
IRQYMEVGPT VDHVPADASS TYKGIARYLH PDYTTYCGKP SRRQYQLEQK PGFMETSFHM
ISQITCSWPT FPKEWQSDSG MGEPEDKPVQ TGAVTTALVY RAQGKLSKAD DIEFLQHWGT
AEAAQEAMSR KE