Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3864 |
Symbol | |
ID | 7969721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4093167 |
End bp | 4094285 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644794450 |
Product | hypothetical protein |
Protein accession | YP_002945744 |
Protein GI | 239816834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.548972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGTTC GAGAAAACAG CTACCGGCTG GCCAGGCGCC GCTCCCCCGA AAAAGGCCGC ACCCAGATCA ACCTGAAAGG GCAAAAACAC TGGCCGACCC AGCGTTCCGG TGCGCGCGGC GTCGTGATTC CAAGTCGGGC TGCCTACGCC CAGAACGATG CGTACCTGGA ACTATGCAAC CCGGGGTGGG ATTTGCAGTG GCGTGCCGGA ATGGGGAATC TCTATGTTGT GCTGCCGGCT CTCGTGCTGA TATGGATGTG GTACGGATTG GCCGTTCATC CATTGCTATT CAAGCAGATC ATCTTCTTCT TCGCGATCAG CGATCGTGTT TCGTCAACGG ATCTGTGGCT AGGCTGGCTC CTGCTATTTC CCCTTGCGTT AGCCAGCGCC TTCATGATCT TCGCGTGGTT CCACTACATG GGCATGCGCA CCTGCTTCTT TACCTTTGCC CGGGGGCGCA TCCGCTTCAA CCGGCTCACG CGCAAGGTGT ATGTGCTGCG GCCCGGCTAC CGCGGCGGCA ACGTGGTGCT GGACTGGGAG CGCCTAGTGG CACTGTTCGA ACCCGAAGGC ACCAGCGCGG GCGCCAAGCA GACCATCAAG GCGCTCGCGC TTTACCACCC GCCGTTCGAC CGGACCGATC CGAGCGCCAA AGGTGAAGAC TGCATCTTCG TCGGTCCGGG ACTGTCGGGA CCGCAAGAGG CGGCGTCTCT GTGGGAGTAC ATCCGCCAGT ACATGGAAGT CGGCCCCACC GTCGATCACG TGCCCGCCGA CGCTTCTTCC ACCTACAAGG GCATCGCGCG CTATCTGCAT CCGGACTACA CGACCTATTG CGGCAAGCCG AGCCGACGCC AGTACCAGTT GGAGCAGAAG CCGGGCTTCA TGGAGACGAG CTTCCACATG ATCAGCCAGA TCACCTGCTC GTGGCCGACA TTCCCGAAGG AATGGCAAAG CGATTCAGGC ATGGGCGAAC CGGAAGACAA GCCGGTGCAG ACGGGCGCCG TGACGACAGC GCTCGTCTAC CGGGCACAAG GCAAGCTGAG CAAGGCCGAT GACATCGAGT TCCTGCAGCA CTGGGGAACG GCCGAGGCGG CGCAAGAAGC GATGTCGCGC AAGGAATGA
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Protein sequence | MFVRENSYRL ARRRSPEKGR TQINLKGQKH WPTQRSGARG VVIPSRAAYA QNDAYLELCN PGWDLQWRAG MGNLYVVLPA LVLIWMWYGL AVHPLLFKQI IFFFAISDRV SSTDLWLGWL LLFPLALASA FMIFAWFHYM GMRTCFFTFA RGRIRFNRLT RKVYVLRPGY RGGNVVLDWE RLVALFEPEG TSAGAKQTIK ALALYHPPFD RTDPSAKGED CIFVGPGLSG PQEAASLWEY IRQYMEVGPT VDHVPADASS TYKGIARYLH PDYTTYCGKP SRRQYQLEQK PGFMETSFHM ISQITCSWPT FPKEWQSDSG MGEPEDKPVQ TGAVTTALVY RAQGKLSKAD DIEFLQHWGT AEAAQEAMSR KE
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