| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3857 |
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| Symbol | |
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| ID | 7969714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4081261 |
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| End bp | 4081977 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794443 |
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| Product | GCN5-related N-acetyltransferase |
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| Protein accession | YP_002945737 |
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| Protein GI | 239816827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.901897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATC GCCACAACGC ATACGGCCAG CCGGTCGGCC CGCTGCTGCC CGGTTGGACC
GCGCGCCCGC TGCCGCCGCG CCGCGCCATC GAAGGCCGGT ACTGCGTGCT CGAACCGCTC
GACGCCGCAA GGCATGCCGA CGACCTCCAT GCCGCCTACG CGCAGGCACC CGACGGCCGC
GACTGGACCT ACCTGGGCGT CGAACGGCCC GCGGATCTCG CGGGCACCCG TGCCCACATC
GAGCGCGCTG CGCAAAGCGC CGATCCGATG CACTTCGCGG TCGTCGACCC GCAGAGCGGC
CGCGCCATAG GTACGCTCGC GCTGATGCGC ATCGACCCCG CGAACGGCGC GATCGAGGTC
GGCAGCGTCA ACTTCTCGCC GCTGCTGAAG CACACGCCGA TGTCCACCGA AGCCCAGCAC
CTGCTGATGA AGCTCGCGTT CGACGAACTC GGCTACCGGC GCTACGAATG GAAGTGCGAC
AACTTCAACG AACCATCGAA GCGCGCAGCC ACGCGCCTGG GGTTCCGCTT CGAAGGTGTC
TTCCGGCAGG CGGTGGTCTA CAAGGGCCGC AGCCGCGACA CCGCGTGGTT TTCGATCACC
GATGGCGAGT GGCCCATGCT GCGCACGGCC TTCGAGCGCT GGCTCGCGCC CGCGAACTTC
GATGCCGAGG GCCGGCAGCG CATGGCGCTC GACCGCTTCA GGCTGCCGCG CGGCTGA
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| Protein sequence | MPDRHNAYGQ PVGPLLPGWT ARPLPPRRAI EGRYCVLEPL DAARHADDLH AAYAQAPDGR
DWTYLGVERP ADLAGTRAHI ERAAQSADPM HFAVVDPQSG RAIGTLALMR IDPANGAIEV
GSVNFSPLLK HTPMSTEAQH LLMKLAFDEL GYRRYEWKCD NFNEPSKRAA TRLGFRFEGV
FRQAVVYKGR SRDTAWFSIT DGEWPMLRTA FERWLAPANF DAEGRQRMAL DRFRLPRG
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