| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3846 |
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| Symbol | |
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| ID | 7969703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4067859 |
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| End bp | 4068872 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794432 |
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| Product | taurine ABC transporter, periplasmic binding protein |
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| Protein accession | YP_002945726 |
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| Protein GI | 239816816 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGT CCCGCCGTCT CCCCCTGCAA CTGGCCGTGC TCGCCACCAC GCTGGCAGCC
TTGTGCGGCA GCGCTTTTGC ACAGCAGGCC AAGGAACTCA CCTTCGCCCA CCAGGACATG
CTGGTCCCCC TGCGCCTCGT CATGGAATCG GGCGAGGTCG AAAAAGCCAC GGGCTACAAG
ATCAACTGGC GCATGTTCTC GGGCGGCGGC GACGTGATCC GCGCCATGGC GTCGGGCGAC
GTGCAGATGG GCGAGACCGG CTCCAGCCCG CTCACGGCCG CGGCCAGCCA GGGGCAGGAC
ATCAAGCTGT TCTGGATATC GGCCGACATC GCCAACGCCG AGGCGCTCAT TGCGCGCAAT
GCCTCGGGCA TCAACAGCAT GAAGGACCTG GCCGGCAAGA AGGTGGCCAC GCCGTTCGTC
TCGACCGCGC ACTACCAGCT CATGGCCGGC ATGAAGATGG ACGGCGTCGA CCCCAGGAGC
GTCAACGTGA TGAACATGCG CCCGCCCGAG ATCGCGGCGG CCTGGGAGCG CGGCGACATC
GACGCCACCT TCATCTGGGA CCCGGTGCTC TCCAAGATCA AGGGCACGGG CAAGACCATC
GCCACTTCGG GCAGCATTGG CAAGCGCGGC GCGCCCACCT TCGAGGGCAT CGTGGTCAAC
GCCAAGTGGG CCGCCGCCAA CGAACCGTTC ATGATCGCCT TCGTGAAGGC GCTGAACCGC
GCGAACGAGG AATACAAGGC CAGCGGCAAG AGCTGGACGC CCGATTCGCC GCAGACCAAG
GCAATGGCCA AGTGGACCAA GGCCGATCCG AAGGACGTGT CGGCCGCGAT GTCGCTCTAC
AGCTTCCCGA CCATGGCCGA GCAGGTCTCG CCCACCTGGC TGGGCGGCGG CGCGGCCAAG
GCGATGGCAG GCACGGCGGC GTTCCTGAAG GAGCAGGGCC GGGTGCAGGA GGTCAAGCCC
GACTACAGCG CCTTCGTGAC CACGGCCTAC GTCGAGAAAG CCATGGGGAA GTAA
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| Protein sequence | MTMSRRLPLQ LAVLATTLAA LCGSAFAQQA KELTFAHQDM LVPLRLVMES GEVEKATGYK
INWRMFSGGG DVIRAMASGD VQMGETGSSP LTAAASQGQD IKLFWISADI ANAEALIARN
ASGINSMKDL AGKKVATPFV STAHYQLMAG MKMDGVDPRS VNVMNMRPPE IAAAWERGDI
DATFIWDPVL SKIKGTGKTI ATSGSIGKRG APTFEGIVVN AKWAAANEPF MIAFVKALNR
ANEEYKASGK SWTPDSPQTK AMAKWTKADP KDVSAAMSLY SFPTMAEQVS PTWLGGGAAK
AMAGTAAFLK EQGRVQEVKP DYSAFVTTAY VEKAMGK
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