| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3841 |
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| Symbol | |
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| ID | 7969698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4061602 |
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| End bp | 4063851 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794427 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002945721 |
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| Protein GI | 239816811 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCCCG CCGCAGGCAT CAGCCGGCGC AGCGCGCTGC AGGCCGGCGG CCTGGCGCTG
GCCTTCACCT GGTTCGGCGC GGGCAAGGCC TTTGCCGCGA TCAGCCCCAG GCAGCAGCCG
GGCGACGCGG CCGCCGCGCT CGCGGACGGC AACCCGGCAT TCGCGCCCAA TGCCTTTGTC
CGCATCGATG CCGACGGCGG CGTGCGCCTC GTGATGCCGA TGGCCGAGAT GGGCCAGGCA
ATCTACACCG GCTCGGCGAT GCTGCTGGCC GAGGAACTGG GCGTCGAGCT CGACCAGGTG
CGCGTCGAAC ATTCGCCGCC GAGCGAGGCG CTCTACGGCA TGCCGCTGCT CGGCGGCCAG
ATCACCGGCG GCTCGACCAG CACGCGCGGC ACCTACGGCG TGCTGCGCGA GGCGGGCGCG
GTGGCGCGCA CGCTGCTGGT GGGCGCCGCC GCCGCGCAGT GGAAGGTCGA CCCCGCGGGC
TGCACGGTCG CGCGCGGCGT GGTGAGCCAC GCGGCCTCCA ACCGGCAGCT CGGTTTCGGC
GCACTCGCCG GTGCCGCTGC CAAATTGCCG ATGCCGGAAA AGGTGACGCT GAAGGAGCCG
AAGGATTTCA AGCTGATCGG CCAGCCGCTG CGGCGCGTCG ATTCGGCCGG CAAGGTCGAC
GGCTCCACGC AGTTCGGCAT CGACGTGCGC CTGCCGGGCA TGAAGGTGGC CACGGTCAGG
GCCTGCCCCA CGCTCGGGGG CGTGCTGGCC TCGGTGGACG ACAAGGCGGC GCGGGCGATT
CGCGGCGTGG TCGACGTGCT GCGCATCAAG GACGCGGTGG CCGTGGTGGG CGAGCATTTC
TGGGCCGCGA AGCGCGGACT CGATGCATTG AAGGTGCAGT GGACGCCGGG GCAGAACGCC
GCGCTCACCA CGCAGCAGCT GCGCGCGTCG CTGGCCAACG CGCTGGCCAA GGACAAGGCC
ATCGTCGGCA AGGAAACCGG CAAGCGGCCT GAAGGCACGC TGGTGCAGGC CACCTACGAC
CTGCCGATGC TGGCCCACGC GACCATGGAG CCGCTCAACA CCACGGTGCA CGTGCGGCCC
GACCAGTGCG AGATCTGGGT CGGCACGCAG GTGCCGACGC GCTGCGTGAG CGCTGCGGCC
AAGATTGCCG GCGTTGCCGA AGACAAGGTC GTGCTGCACA ACCAGTACCT GGGCGGCGGC
TTCGGCCGCC GGCTCGAGAC CGACTCGGTC GAGCAGGCCG TGGCCTTCGC CAAGCAGGTG
CCCTACCCGC TCAAGGTGGT GTGGACGCGC GAGGAAGACA TCCGCCACGA CATCGTGCGA
CCGATGTACC ACGACGACAT CTCGGCCGTG GTCGACGGCG ACGGCCAGAT CCTCTGGTTC
GGCGACCGCA TCGCGGGCGG CACGGTGCTG GGCCGCTGGG CCCCCGCCTT CATGGGCAAG
GACGGCATGG ACAGCGACCT GATCGAATGC ATCGCCGAAC CTTGCTACGA CCTGCCGAAC
CTCAAGGTCG AGTGGGTGCG GCACGACATG CCGGCGGGCC TGAACGTCGG CTGGTGGCGC
GGCGTGGGGC CGACGCACAA CCTCTTCGTG ATGGAGAGCT TCATCGACGA GCTCGCGCAC
CGCGCGAAGA AAGACCCCGT GGCCTACCGG CGCGCCATGC TGAAGAAGAA CCCGCGCACG
CTCGGGGTGC TCGACCTGGC GGCCGGCAAG ATCGGCTGGG GCCAGGGCGC GCTGGCGGCG
CGCGTCGGAC GCGGCGTGGC CGTGGGCGAT GCCTTCGGCA GCCGCGTGTG CGCCATCGTC
GAGGCCGAGG TCACGCCGCA GGGCGAAGTG CGCATGCGGC GCGCGGTGGT CGCGGTCGAT
TGCGGCATTG CCGTGAACAC AGGCTCCATC GAGGCGCAGA TCCAGGGCGG GCTGCTGTTC
GGGCTGAGCG CGGCGCTCTT CAGCGAGATC ACGCTGCGCG AGGGGGCCAT CGAGCAGAGC
AACTTCCACG ACTACCGGAT GCTGCGCATC AACGAGGCGC CGCCGGTCGA GGTCCACACC
GTGAAGAGCG GCGAAGCGCC CGGCGGGCTT GGCGAAGTCG GCACCGCCAT CGCCGCGCCG
GCGCTGGCCA ACGCGATCTT CGCGGCGACG GGCGTGCGGC TGCGCGCGCT GCCGGTGAAC
CGCGCACTGC TGGCGCAGGA CAAGGAGGCG CTGAAGAAGA AGATCGCCAA TGCGGGGCTC
TCCGGGCTCG GCGCAAGGAG TGCAGCATGA
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| Protein sequence | MKPAAGISRR SALQAGGLAL AFTWFGAGKA FAAISPRQQP GDAAAALADG NPAFAPNAFV
RIDADGGVRL VMPMAEMGQA IYTGSAMLLA EELGVELDQV RVEHSPPSEA LYGMPLLGGQ
ITGGSTSTRG TYGVLREAGA VARTLLVGAA AAQWKVDPAG CTVARGVVSH AASNRQLGFG
ALAGAAAKLP MPEKVTLKEP KDFKLIGQPL RRVDSAGKVD GSTQFGIDVR LPGMKVATVR
ACPTLGGVLA SVDDKAARAI RGVVDVLRIK DAVAVVGEHF WAAKRGLDAL KVQWTPGQNA
ALTTQQLRAS LANALAKDKA IVGKETGKRP EGTLVQATYD LPMLAHATME PLNTTVHVRP
DQCEIWVGTQ VPTRCVSAAA KIAGVAEDKV VLHNQYLGGG FGRRLETDSV EQAVAFAKQV
PYPLKVVWTR EEDIRHDIVR PMYHDDISAV VDGDGQILWF GDRIAGGTVL GRWAPAFMGK
DGMDSDLIEC IAEPCYDLPN LKVEWVRHDM PAGLNVGWWR GVGPTHNLFV MESFIDELAH
RAKKDPVAYR RAMLKKNPRT LGVLDLAAGK IGWGQGALAA RVGRGVAVGD AFGSRVCAIV
EAEVTPQGEV RMRRAVVAVD CGIAVNTGSI EAQIQGGLLF GLSAALFSEI TLREGAIEQS
NFHDYRMLRI NEAPPVEVHT VKSGEAPGGL GEVGTAIAAP ALANAIFAAT GVRLRALPVN
RALLAQDKEA LKKKIANAGL SGLGARSAA
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