| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3835 |
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| Symbol | |
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| ID | 7969692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4055954 |
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| End bp | 4056769 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794421 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002945715 |
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| Protein GI | 239816805 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.790714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTC CCGCGCGCCC TGCAGCCGCC GTGTCTTCGC CATCGCTTTC CGTGCCCGCC
GCGGAGGAGT CCGCTTCCGG CTCGTCGGCC GAGCGCAGCC TGCGCCTGCT GGCCTTGCTG
GCCAGCGAAG GCCGCGCCCT CACGCTCGCC GACCTGGCCG CGCAGCTGGG GCTGCCCAAG
GGCACGGCGC ACCGCATCTG CACCCAGCTG CTGGCCACCG GCTTCCTGGC GCGCGACGTG
GACGAGCGTT CGTTCAGCGT CGGCCCCGCG CTGCGCAAGC TGGCCTTCGA CACCCTGAAC
CACGGCACGG TGCGCGGCCT GCGACACGAG GTGCTGTCCG AACTCGTGCG GCAGGTGGGC
GAGACCTGCA ACCTCACCAC GCTCGACGGC GCCCAGGTGC TGTACCTCGA CCGCGTGGAG
GCGAAGTGGC CGCTGCGGCT CACGCTCGAT GTCGGCTCGC ATGTGCCGCT GCACTGCACC
GCAAGCGGCA AGCTGTTCCT CGCGCAGATG CCCAGGAAGG AGCGCGACGC GTTCATCGAG
CAACTGCCGC TTGCGCGCAT GACGGCCAAC ACGCTCGTCA AGGCCGACGC GCTGCGCACC
GAATGCGATG CGATCGCCAG GCGCGGCTAT TCGCGCGACT GCGAGGAATT CATCGCGGGG
CTGGTGGCCG TGGCGGTGCC GGTGCGCGAC GCGGCCGGGC AGGTGCGCGC GGCGCTCGCG
GTGCACGCGC CGACCGCACG CATGTCGATG GAGGAAGCGG TGAAGCGCAT CGATGCGCTC
AAGGCCGCCG CGCAGCGCAT GGGCACGCTG CTCTGA
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| Protein sequence | MPRPARPAAA VSSPSLSVPA AEESASGSSA ERSLRLLALL ASEGRALTLA DLAAQLGLPK
GTAHRICTQL LATGFLARDV DERSFSVGPA LRKLAFDTLN HGTVRGLRHE VLSELVRQVG
ETCNLTTLDG AQVLYLDRVE AKWPLRLTLD VGSHVPLHCT ASGKLFLAQM PRKERDAFIE
QLPLARMTAN TLVKADALRT ECDAIARRGY SRDCEEFIAG LVAVAVPVRD AAGQVRAALA
VHAPTARMSM EEAVKRIDAL KAAAQRMGTL L
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