| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3830 |
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| Symbol | |
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| ID | 7969687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4050067 |
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| End bp | 4051059 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794416 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945710 |
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| Protein GI | 239816800 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.956859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGT TGTTCCCCGC CCCCTGGCTG CGCGCCGCGC TGCTGGCCGC GGCCACCCTG
GCTCTGCCCT TTGCCGCGCA GGCGCAAAAC GGCACCGACT ATCCGAACAA GCCGATCCGG
CTCGTCGTTC CGTACCCGCC CGGCGGCGGC ACCGACGTGA TCGCGCGCAT CGTGCAGGAG
CGCTTCTCGT CGCTGCTCGG CCAGCAGGTG CTCATCGACA ACCGCGGCGG CGCGGCCGGC
TCCATCGGCA CCGAGATCGT GGCCAAGGCC CCGCCCGATG GCTACACGGT GCTGTTCACG
CTGTCCTCGC ACACCATCAA CCCGGCGATC TACACCAAGC TCTCGTTCGA CACCGCGAAA
GACTTTGCGC CCGTGGGCCT GGTCGCTTCG CTGCCGCAGA TCCTGGTGGC CAACACGCAG
TTCGCGCCCA ACACGGTGGC CGAGCTGGTG GCGCTCGCCA AGGCCAAGCC GGGCTCGCTT
TCCTTCGCCT CGGTGGGCAA CGGCTCGCCC GGGCACCTGG CGGGCGAGCT GCTGAAGCTG
CGCACCGGCA CCCAGATGAC GCACATCCCC TACCGCGGCG GCGGCCCGGC CGTGACCGAC
GTGATGGGCG GGCAGGTGCC GCTGCTGTGG GTGTCGATTC CCGCGGCCGC GCAGTTCGTG
AAGGCCGGCA AGCTCAAGGC GCTGGCGGTG TCGACCACCA AGCGCAGCGC CGCCTTCCCC
GATGTGCCCA CGATGCAGGA AGCGGGCATT GCCGATTTCG ACGTCGACTC CTGGTACGCG
GTGTTCGTGC CCGCGAAGAC GCCGCAGCCC ACCATCGACA AGCTCAACCG CGTCATCAAC
ACGGTGGTCA AGGAACCGGA GATCCGTGAC AAGCTGCTGG CGCAGGGCAG CGAAGGCGTC
GGCGGCACGC CGGAGCAATT GGGCAAGGTG GTGACCACGG AACTCGTGCG CTGGCAGAAG
CTCGCAAAAG AAGCCAGCAT CAAGGTGGAT TGA
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| Protein sequence | MNLLFPAPWL RAALLAAATL ALPFAAQAQN GTDYPNKPIR LVVPYPPGGG TDVIARIVQE
RFSSLLGQQV LIDNRGGAAG SIGTEIVAKA PPDGYTVLFT LSSHTINPAI YTKLSFDTAK
DFAPVGLVAS LPQILVANTQ FAPNTVAELV ALAKAKPGSL SFASVGNGSP GHLAGELLKL
RTGTQMTHIP YRGGGPAVTD VMGGQVPLLW VSIPAAAQFV KAGKLKALAV STTKRSAAFP
DVPTMQEAGI ADFDVDSWYA VFVPAKTPQP TIDKLNRVIN TVVKEPEIRD KLLAQGSEGV
GGTPEQLGKV VTTELVRWQK LAKEASIKVD
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