| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3829 |
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| Symbol | |
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| ID | 7969686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4049276 |
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| End bp | 4050070 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794415 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002945709 |
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| Protein GI | 239816799 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.602522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCA CCCTCGCCAA AGGCCTTGCC GCCATCGAAT GGATGACACG GCAACAGCGC
GACTGCCGCG TCACCGACCT CGCCCAGGCC TTCGGCATGG CGCGCAGCAA CGCGCACCGC
ACCCTGCAGA CCCTGGTCGA CTGCGGCTGG GCCGTGCAGG ACCCGGACAC CAGCGCCTAC
CGCCCGAGCC TGCGACTGTT CGAACTGGGC GCGCTGGTTT CCGAGGCCAC CGACATGGGC
TCGCTGCTGC GGCCGCACCT CGCGGCGCTG GCGCAGCAGA CCGGCGAGAC CATCCACCTT
GCGGTGCTCG ACGGCGCCGA GATCGTCTAC CTCGACAAGT TCGACAGCCC CCTGCCCGTG
GCCGCCTATT CGCGCATCGG TGGCCGGGCG GCGGCGTACT GCGTGGCTTC GGGCAAGGCC
CTGCTTGCCG CGGCCGCGCC GGACCTTTCC GCGCTGCACG AGCGCCTCGG CACGCTCGCG
GCGCACACCA AGAACAGCAT CACCAGCTTC GATGCCCTTC TCTCGGAACT CGAACGCACG
CGCGTTCGCG GCTATGCGGA AAACCGCGAG GAATGGCGCC TCGGCGTCTG CGGTCTGGGC
GTGCCGGTGT TCAACGCGCG CGGCGAGGCC GTCGCGGCCG TCGGCATGAG CGTGCCCTCG
ATCCGCTTCG CGCGGACGCA GGCGCGCGGA CTGGCCGACC GCCTCATGGC CTGCGCGCGC
GACGCGAGCG TCACGCTCGG CTACCGGGCG AGCCCGCTGC CGACATCCAC CACAAGGAGA
AGGAGACTCG AATGA
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| Protein sequence | MDSTLAKGLA AIEWMTRQQR DCRVTDLAQA FGMARSNAHR TLQTLVDCGW AVQDPDTSAY
RPSLRLFELG ALVSEATDMG SLLRPHLAAL AQQTGETIHL AVLDGAEIVY LDKFDSPLPV
AAYSRIGGRA AAYCVASGKA LLAAAAPDLS ALHERLGTLA AHTKNSITSF DALLSELERT
RVRGYAENRE EWRLGVCGLG VPVFNARGEA VAAVGMSVPS IRFARTQARG LADRLMACAR
DASVTLGYRA SPLPTSTTRR RRLE
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