| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3826 |
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| Symbol | |
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| ID | 7969683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4045261 |
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| End bp | 4046097 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794412 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002945706 |
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| Protein GI | 239816796 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGGC CCATGAAGAT CGTCAAGGGG CCCACGCCCG AAACTCTGGA GCCGGCGCCG
GGCGACACAC CCACCATGCG CCTGTTCGGA CTGCTCGAAG TCATGGCCGC CAAGGACCAG
CGCTACTCGC TGCAGGGCCT GGTGGAAGAG ACCGGCATGC CCAAGCCCAC CCTGCACCGC
ATGCTCCAGC AGCTCGAAGG CGCAGGCCTG CTGCAGCGCG AGGGCGACGG CCGCCACTAC
GGCATCGGTA CGCGGCTGCG GCGGCTGGCC GAGAACCTGC TGCTCAACGA CAGCCTCCAC
GGTGCACGCC ATACGGTGCT GCGTCAACTG GTGGAAGAAA TCGGCGAGAG CTGCAACCTC
ACCGCGCTCT CGGGCAGCGA GGTGGTGTAC CTCGACCGCG TGGAAACCGC CGCGCCGCTG
CGCTTCTACC TGCACTCGGG CTCGCGCGTG CCGGTGCACT GCTCGGCCAG CGGCAAGATC
TTTCTCGCGC AGATGAGCGC AGCGCAGCGC CGCCGCCTGC TCTCCAACGC GCCGCTGGAG
CCCTACACGC CCCGCACGCT CACCGACCCC GACGCGCTCG AAAAGGAAGT GCAGCGCGTG
CGCAAGGACG GCTACGCCAT CGACAACGAA GAGTTCCTGC CCGGCCTGCT GTGCATTGCG
GCGCTGGTGC CTTCGGGCGA CGACGGCCCC TCGAACCTGT GCATCGCGGT GCAGGCGCCG
GTCATGCGGC TCGATGCCGC GAAGGCGAAG GCGCTGCTGC CGGCATTGCA GCGTGCTGCC
GAGGCGCTGA GCCGCATCGA TGCCGACGCG GGCACCACCA GCCGCGCGCA GGCCTGA
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| Protein sequence | MIRPMKIVKG PTPETLEPAP GDTPTMRLFG LLEVMAAKDQ RYSLQGLVEE TGMPKPTLHR
MLQQLEGAGL LQREGDGRHY GIGTRLRRLA ENLLLNDSLH GARHTVLRQL VEEIGESCNL
TALSGSEVVY LDRVETAAPL RFYLHSGSRV PVHCSASGKI FLAQMSAAQR RRLLSNAPLE
PYTPRTLTDP DALEKEVQRV RKDGYAIDNE EFLPGLLCIA ALVPSGDDGP SNLCIAVQAP
VMRLDAAKAK ALLPALQRAA EALSRIDADA GTTSRAQA
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