| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3823 |
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| Symbol | |
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| ID | 7969680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4041101 |
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| End bp | 4042093 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794409 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945703 |
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| Protein GI | 239816793 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.363673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC GCGAATGGAT GCAGGGGACC ACCGCCCTGG CTGCGGCGGG ATCGCTGGGC
GCGCTCATGC CGATGCTGGC CCGCGCGCAG GGCGGCGACT ACCCCAAGCC GGACGCCACG
CTGCGCTACG TGGTGCCCTT TCCGCCGGGC GGCCTGACGG ACGTGATGGC GCGGCAGATC
GGCCAGCAGC TGGGCGAGCG CTGGAAGGTC AACGTGCTGG TGGACAATCG GCCCGGCGGC
AACGGGCAGA TCGGCGCCGA CCTGGTGGCC AAGGCGCCGC CCGACGGCAA CACGCTGCTC
GCGGTCACGC TGACGCACGC GGCCAACGTC ACGCTGTTCC CGAAGTCGCC GTTCAGCTTC
CAGAAGGACC TGCGGCCGGT GGCGCTGCTG GCCGGCAGCC CGATGCTGAT CGTGGTGCCC
GTGGCCAGCC CCATCCAGGA CATGAAGGGC CTCGTCGCGG TGGCGAAGGA GCGCAAGCTC
AACGCCGGCT CCAGCGGCAA CGGCACGCCG CCCCACCTGA CGCTCGCGCT CTTCAACGAC
CTCAACAAGT CCAACATCCA GCACGTGCCC TACAAGGGCG GCGCGCCGTG CATCACCGAC
CTCATCGGCG GCCAGCTCGA CGTGGTGTTC TCGAACATTC CGGAGTCGAT CGCGCATGTG
AAGGGCGGCA AGCTGCGCGC GCTCGCCATC GCCAGCAAGA CCCGCTATCC CTTGCTGCCC
GAGGTGCCGA CCACCGCCGA AGCCGGCATG CCCGCGCTGC AGGTCGAGAA CTGGACCGGC
ATGATGGCGC CGGCCGGCAT GCCCGATGCC GCGGTGCAGA AGCTGGGCGC GGAGGTGGTG
AAGATCCTCG CGCAGCCCGG CCTCGACGAG CGCATGCGCC AGCAGGGCTT CGTGATCGAT
GCGCGCGGGC CCGACCGCTT CGGGGCGTTC CTGGCCGACG AGATCGCGCG CTGGGCGCAC
GTCATCAAGG CGGCGGCTAT CCAGCCTGGC TGA
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| Protein sequence | MKRREWMQGT TALAAAGSLG ALMPMLARAQ GGDYPKPDAT LRYVVPFPPG GLTDVMARQI
GQQLGERWKV NVLVDNRPGG NGQIGADLVA KAPPDGNTLL AVTLTHAANV TLFPKSPFSF
QKDLRPVALL AGSPMLIVVP VASPIQDMKG LVAVAKERKL NAGSSGNGTP PHLTLALFND
LNKSNIQHVP YKGGAPCITD LIGGQLDVVF SNIPESIAHV KGGKLRALAI ASKTRYPLLP
EVPTTAEAGM PALQVENWTG MMAPAGMPDA AVQKLGAEVV KILAQPGLDE RMRQQGFVID
ARGPDRFGAF LADEIARWAH VIKAAAIQPG
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