| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3818 |
|---|
| Symbol | |
|---|
| ID | 7969675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 4036408 |
|---|
| End bp | 4036689 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644794404 |
|---|
| Product | D-galactarate dehydratase/altronate hydrolase, N-terminal |
|---|
| Protein accession | YP_002945698 |
|---|
| Protein GI | 239816788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0784034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATT TCGTTCTGCA CGACGCGAAG GACACGGTCG CGGTCGTGGT GGTGGAAGGC
GTCAAGGCCG GCATGTCGCT CAGCGGCTGG ATCATGGACG AGGACCGCAT GACCAGCGTC
GATGCGCGCC AGGACATCCC GATCGGCCAC AAGGTCGCGC TCAAGGACAT GGCGCCCGGC
GACACGGTGT GGAAGTACGG CATCGACATG GGCAAGGTGG TCGCGCCGAT CAAGGCCGGC
GAGCACGCGC ACGTGCAGAA CATCAAGACC AAGCGCTGGT AG
|
|---|
| Protein sequence | MIHFVLHDAK DTVAVVVVEG VKAGMSLSGW IMDEDRMTSV DARQDIPIGH KVALKDMAPG
DTVWKYGIDM GKVVAPIKAG EHAHVQNIKT KRW
|
|---|
| |