| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3816 |
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| Symbol | |
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| ID | 7969673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4034553 |
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| End bp | 4035494 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794402 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945696 |
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| Protein GI | 239816786 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0677379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAA AAACAGATCA GCAGCAACAG CACACCGCGC AGCGGCTTCG GCTCAACCTG
CGCCAGCTCG AAGTGTTCGT GGCCACGGCC CGGGGCGGCA GCACGCGCGC CGCGGCCGAC
CGCGTCGCGC GCTCGCAGTC GGCCGCGAGC AGCGCGCTGG CCGACCTGGA GTCTTCCGTG
GGCGCCCTGC TGTTCGACCG GCTCGGCCGC CGGCTGGTGC TCAACGAGAA CGGCCGCGCG
CTGCTGCCCA AGGCCCAGGC CCTGCTCGAC CAGGCCGGCG AGGTGGAGGC ACTGTTCAGC
GGCGAGCATG CGGCGCCGCT GCGCGTGGCG GCCAGCTTCA CCATCGGCGA ATACCTGCTG
CCCGAGCGCG TGTCGCAATG GACGGAACTC CATCCGCAGA GCCAGGTTCA CCTGCACATT
GCCAACACGC GCGACGTGAT CGAGGCGGTG GCGGGGTTCG ACGTGGACGT CGGCTTCATC
GAGGGGCCGC AGACGCACCC CGACCTGGTG GTGCGCGCTT GGCGCGAAGA CGAGCTGGTG
ATCGTCGCCG CACCGGGCCA TCCGCTCGCC AAGCGCATTG CCACGCACCA CCAGCTCTCG
CAGGCCACCT GGGTGCTGCG CGAGCACGGT TCGGGCACGC GGCAGGTCAC CGATGCGTGG
CTGATCCAGA ACCTGGAACA GGTGCGCGTG GGCTTCGAGC TCGGCAGCAC CGAGGCCATC
AAGCGCGTGG TGGCCTCGGG CACGGGCCTG GCCTGCCTCT CGCGCTACAC GGTGGCGCAG
GCGCTGGAAG ACGGCCACCT GATCGAGCTG CGCACGCGGC TGCCGGCGGG CATGCGGCGG
CTGGCCACGG TGATGCACCG CGACAAGCTG CTGGGCCGCG CGACGGCGGA TTTCCTGCGG
CATTGCGGGG CGACCGTGCC GCGCATGCCG GCCGCGCGTT AG
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| Protein sequence | MTGKTDQQQQ HTAQRLRLNL RQLEVFVATA RGGSTRAAAD RVARSQSAAS SALADLESSV
GALLFDRLGR RLVLNENGRA LLPKAQALLD QAGEVEALFS GEHAAPLRVA ASFTIGEYLL
PERVSQWTEL HPQSQVHLHI ANTRDVIEAV AGFDVDVGFI EGPQTHPDLV VRAWREDELV
IVAAPGHPLA KRIATHHQLS QATWVLREHG SGTRQVTDAW LIQNLEQVRV GFELGSTEAI
KRVVASGTGL ACLSRYTVAQ ALEDGHLIEL RTRLPAGMRR LATVMHRDKL LGRATADFLR
HCGATVPRMP AAR
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