| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3812 |
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| Symbol | |
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| ID | 7969669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4027458 |
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| End bp | 4029635 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794398 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002945692 |
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| Protein GI | 239816782 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.331963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGGC AAGCGACTCC CTTCATCGGG CAGCCGGTCG ACCGCGTGGA CGGCCGCCTC
AAGATGACCG GCCAGGCGCG CTATGCGGCC GAGTTCTCGT ACCCGGGGCT GGTGTACGGC
GTTGCGCTGG GCAGCACCGT GGCGGCCGGG CGCGTGCGCG ACATCGACAC CGCGGCCGCG
GAGCAATTGC CCGGTGTGCT GCTGGTGCTC ACGCACAAGA ACGTGCCCAA AATGGCGCCG
CCCGCGCCCG AAACGCCGCA GAACCGCTTC ACGCGCGCCA CGCCGCTGCT GCAGGACACG
GCCATTCACC ACCACGGCCA GCTCATCGGC TTTGTGGTGG CCGAAACGCT CGAGCAGGCG
CGCCATGCGG CCACGCTGGT GAAGGTGAGT TACGACGCGG CGCAGCCCCG CATCGGCTTC
GATGCCAACG TCAAGAACGC CTATGCGCCG GCGGCCATCA ACGCCGGCTA CAAGACCGAC
ACGCGGCGCG GCGACCTCGA CCAGGGCCTG CGCACCGCGG CGGGCACGGT CGATGCGGTC
TACAACACGC CCATCGAGCA CCACCACCCG ATGGAGATGC ACGCCACCGT GGCCGCATGG
GAGGGCGACG ACAAGGTCAC GGTGCACCAC TCGCTGCAGA TGGTGAGCGA TGCCGCCCCG
GCCATTGCCG CCACCTTCGA CATTCCGCGC GAGAACGTGC GCGTGGTGTG CCCGTTCGTG
GGCGGCGGCT TCGGCAGCAA GATCCTCACA CGCGACAACG CGATGCTCAC GGTGCTGGCC
GCGCGCCTCG TGAAGCGGCC GGTCAAGCAT GTGCTCACGC GGCAGCAGAT GTTCATGGTG
GTCGGCCTAC GCCAGCACAA CCGCCAGCAC ATGCGGCTGG GTGCGGATGC GAGCGGCCGG
CTCACGGGGC TGGGCCACGA CACCGTCACC CACACCTCGG TGCACGAGGA GTTCGTCGAG
CAGACCGGCG TCATCTCGCG AATGATGTAC GAGGTGCCGA ACTCGCAGGT CACCCACCGC
GCCTTCCGCC TCAACGTGCA GACGCCCAAG TGGACCCGCG CACCGGGCGA GGCGCCCGGC
AGCTTTGCGC TCGAATCGGC GATGGACGAG CTTGCCGAGC AGCTGAAGAT CGACCCGGTG
GAACTGCGCG TGAGGAACGA CGCCAGGACC GACCTCGACA CGGGCAAGCC CTTCGGCAGC
CGCTCGCTGG TCGAATGCCT GCGCATCGGC GGCGAGAAAT TCGGCTGGAG CAACCGCAGC
GCCATGCCGC GCAGCCGCAG GCAGGGCCAC TGGCTCGTGG GCTACGGCAT GAGCGCGGCA
TCGCGCGGCG CACCGCATCG CGGCGCCTCG GCCAACCTCT TGCTCACGCG CAGCGGCCGC
GACGTGCGCG CGGTGGTGGA GATGTGCGCG ACCGATCTTG GCACCGGCAG CTACACCGTC
ATTGCGCAGA CCGCGGCCGA GACGCTGGGC CTGCCGCTCG ACAAGGTGCA GGTGCGGCTC
GGCGATTCGG CGCTGCCGCC CACGCCAGGC TCGGGCGGCT CCTGGGGCGC CAACACCTTC
TGCACCGCGG CGCTCGCGGT CTGCGAAGCG GCCAAGCAGC AGCTGCGCGA GAAGGTGAGC
CTGCGCTTCG TGCGCGAACC CAGCGTGGCG GAGCTGCTGC AGGCGGCCCA GCTGAACGAA
TGGCGGGCCA GCAACACGGC CACGCCGGGC GCGGACATCG CCGCCTGGTC GCACTACGCC
TTCGGTGCCA ACTTTGCCGA AGTGTGGGTC GACGAAGACC TGGGGCTGGT GCGCGTGCCG
CGCTACCTGG CGGTGATTGC GGCCGGGCGC ATCCTCAACC CCAAGACCGC GGCGTCGCAG
ATCATCGGCG GCATCGTCTG GGGCATCGGC AACGCGCTGA TGGAAGAGTC GGTGCTCGAC
GAGCGCAGCG GCCACTTCGT CACGCGCACG CTGGCCGACT ACCACGTGCC CGTGAACGCG
GACATCGGCG ACGTGCAGGT GCTCTTCGCG CCCGAAACCG ACACCCGGGT CAACCGCATG
GGCGTGAAGG GCGTGGGCGA GATCGGCATC ACCAGCGTGG CCGCCGCCAT TGCCAACGCG
GTGTACAACG CCACCGGACG CCGCGTGCGC GACCTGCCGA TCACGCCCGA CAAACTGCTG
ACGCCGATCC AGGCATGA
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| Protein sequence | MNRQATPFIG QPVDRVDGRL KMTGQARYAA EFSYPGLVYG VALGSTVAAG RVRDIDTAAA
EQLPGVLLVL THKNVPKMAP PAPETPQNRF TRATPLLQDT AIHHHGQLIG FVVAETLEQA
RHAATLVKVS YDAAQPRIGF DANVKNAYAP AAINAGYKTD TRRGDLDQGL RTAAGTVDAV
YNTPIEHHHP MEMHATVAAW EGDDKVTVHH SLQMVSDAAP AIAATFDIPR ENVRVVCPFV
GGGFGSKILT RDNAMLTVLA ARLVKRPVKH VLTRQQMFMV VGLRQHNRQH MRLGADASGR
LTGLGHDTVT HTSVHEEFVE QTGVISRMMY EVPNSQVTHR AFRLNVQTPK WTRAPGEAPG
SFALESAMDE LAEQLKIDPV ELRVRNDART DLDTGKPFGS RSLVECLRIG GEKFGWSNRS
AMPRSRRQGH WLVGYGMSAA SRGAPHRGAS ANLLLTRSGR DVRAVVEMCA TDLGTGSYTV
IAQTAAETLG LPLDKVQVRL GDSALPPTPG SGGSWGANTF CTAALAVCEA AKQQLREKVS
LRFVREPSVA ELLQAAQLNE WRASNTATPG ADIAAWSHYA FGANFAEVWV DEDLGLVRVP
RYLAVIAAGR ILNPKTAASQ IIGGIVWGIG NALMEESVLD ERSGHFVTRT LADYHVPVNA
DIGDVQVLFA PETDTRVNRM GVKGVGEIGI TSVAAAIANA VYNATGRRVR DLPITPDKLL
TPIQA
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