| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3810 |
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| Symbol | |
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| ID | 7969667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4025699 |
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| End bp | 4026472 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794396 |
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| Product | (2Fe-2S)-binding domain protein |
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| Protein accession | YP_002945690 |
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| Protein GI | 239816780 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.166956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCC TCCTTTCCGA TGAACGGCAG GCCGATGCCT TGCCTGACGA CGATAACGAC
GACAGCAACC CTCTTCTCCC CTCACCCGCC GGCCAGCTGA CCCGCCGCGC CTTCCTTGCG
GAAAGCGGGA CGACCGGCAT CGCCGGCATC CTGGCGTCCG CGCCCATGGC AGCGTCCGTC
GCAACGGCCG CGCAGGCGAA TGCCGATGCA GCGCCGCCCT CTTCGTCTTC CATGGCCCTG
GCCCTGCGCG TCAACGGCAA GCCGCATGCG CTGCAAGTCG ATCCGCGCAC GACCCTGCTC
GACCTGCTGC GCGAGCAGAT GGCGCTGCCG GGTACGAAGA AAGGCTGCGA CCACGGCCAG
TGCGGCGCGT GCACGGTGCT CGTCAATAAC CGCCGCATCA ATTCCTGCCT GGCGCTCGCG
CTCTCGCATG ATGGCGCGGA CGTCACCACC ATCGAGGGGC TGGCGCGCGG CAGCGAGCTG
CATCCGATGC AGGCCGCCTT CATCAAGCAC GACGGGTTCC AGTGCGGCTA TTGCACCTCG
GGGCAGATCT GCTCGGCCGT GGGCATGCTG CGCGAGGCCG AACAGGGCGC ACCGAGCCAT
GTCACGACCG ATGTGCGGCG CACCGGGCCG GTGGCGCAGC TGAGCGACGC CGAGATCCGC
GAGCGCATGT CGGGCAACAT CTGCCGCTGC GGCGCCTATC CCGGCATCGT GGCCGCGGTG
CGCGAAGTGA GCCTGATGCC GCGCGCGGGC AACAGCCGAA GGAGCCGCGC ATGA
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| Protein sequence | MTSLLSDERQ ADALPDDDND DSNPLLPSPA GQLTRRAFLA ESGTTGIAGI LASAPMAASV
ATAAQANADA APPSSSSMAL ALRVNGKPHA LQVDPRTTLL DLLREQMALP GTKKGCDHGQ
CGACTVLVNN RRINSCLALA LSHDGADVTT IEGLARGSEL HPMQAAFIKH DGFQCGYCTS
GQICSAVGML REAEQGAPSH VTTDVRRTGP VAQLSDAEIR ERMSGNICRC GAYPGIVAAV
REVSLMPRAG NSRRSRA
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