Gene Vapar_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3804 
Symbol 
ID7969661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4017621 
End bp4018364 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID644794390 
Producthypothetical protein 
Protein accessionYP_002945684 
Protein GI239816774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACC TTGACTGGCA ATACGAGCTC CACGTCTTCG GCACATCGAA GAAGGCGCTG 
TCGCTCGAAG ACTTTGCCGA GCTTGCGAAG AAGCTCGCGG GGTTGCTCGG GTCGCGGGAC 
CATGTGCACT TCGGAGCCCT ACGAGACGGG AGTGCCAAAC TACTTGCCAA AGTGGAAGAG 
CCGGCTCTGC AGGCGGTGGA GGTGCAACTT CTTCGAGCCA AGAACGACGA AGGTCCAGCC 
GCCGGCAAGG TGGTCAACCT GAACGAATAC CTTGGGCTCA AAGGCTGGCG CGCTGAACTG 
AAGAATTCGC AGGGAGGCGT CGTGCTGAAC TTCCCCGGCG CGCTGAACAA GCCGACTCCT 
GAACCCGTTC AGACAGTTCA TCAGAACGAC TCGCTTGTCG GTCAAGTCAT CAAGATTGGT 
GGCCGCGATG AAACTGTTCC CATGACGATC AAGACACCTG ATGGCGCGTT CGTCGATGTG 
ACCGTCAAGG GTCGAGAGCA AGCCAAGAAG CTTGCTCAGC ACCTATTCGG CAATGACGTC 
AAGCTGACCG GGAACGCGAC TTGGACGCGG GATGAAGAAG GTCATTGGAG TTGCAGCGAC 
ATGGAAGTAC TTTCGTTCGA GGAACTGGAG ACCACTTCGC TGGTTGATCT CTTCGAATCC 
CTTCGGCAAG TCCCGGACAA CCACTGGCAC CAGGTCGAAG ACCCGATAGC CGAGTGGAAG 
AAGCAGCACC GAGAGGACCA CTGA
 
Protein sequence
MKHLDWQYEL HVFGTSKKAL SLEDFAELAK KLAGLLGSRD HVHFGALRDG SAKLLAKVEE 
PALQAVEVQL LRAKNDEGPA AGKVVNLNEY LGLKGWRAEL KNSQGGVVLN FPGALNKPTP 
EPVQTVHQND SLVGQVIKIG GRDETVPMTI KTPDGAFVDV TVKGREQAKK LAQHLFGNDV 
KLTGNATWTR DEEGHWSCSD MEVLSFEELE TTSLVDLFES LRQVPDNHWH QVEDPIAEWK 
KQHREDH