| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3793 |
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| Symbol | pepN |
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| ID | 7970953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4008453 |
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| End bp | 4011167 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794379 |
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| Product | aminopeptidase N |
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| Protein accession | YP_002945674 |
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| Protein GI | 239816764 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGC AGCGTGACGC CCAAGGGCAA CCGATTGCCA TTCGCCGCGA AGACTATGCC
GCTCCGGCAT TCTGGATCGA CACCGTCGAC CTCACCTTCG ACCTCGACCC TGCCAAGACC
CGCGTGCTCA ACCGCATGCA GCTGCGCCGC AACCCCGACG CACCGGCCCA GCCGCTGCGC
CTGGACGGCG ACGAGCTGAA CCTGGCGCGC GTGCTGGTCA ACGGCCAGGG CGCATCGTTC
CGCATGGAAG GCGACCAGCT CGTCATCGAC GGCTTGCCCG ATGCCTTCGA GCTCGAGATC
TTCACCACCT GCTGCCCCAT CAAGAACACC AAGCTGATGG GCCTGTTCGT GAGCGAAGAC
ACCTTCTTCA CGCAGTGCGA GGCCGAGGGC TTTCGCCGCA TCACCTATTT TCTCGACCGT
CCGGACGTGA TGGCGATGTA CACCGTCACG CTGCGCGCCG CCAAGGCCGC CTACCCGGTG
CTGCTGTCGA ACGGCAACCT CGTCGAGCAG GGCGATCTGC CCGAGGGCCG CCACTTCGCC
AAGTGGGTCG ACCCCTTCAA GAAGCCCTGC TACCTGTTCG CGCTGGTGGC CGGCAAGCTG
GTGGCGCGCG AGCAGCGCAT CACCGCGCGC AACGGCAAGG AACACCTGCT GCAGGTGTAC
GTGCGCGCCG GCGACCTCGA CAAGACCGAG CATGCGATGA ACTCGCTGGT CAACTCCGTG
CTGTGGGACG AAGCCCGCTT CGGCCTGCCG CTGGACCTGG ACCGCTTCAT GATCGTGGCC
ACCAGCGACT TCAACATGGG CGCCATGGAG AACAAGGGCC TGAACATCTT CAACACGAAG
TACGTTCTGG CCAACCAGGC CACCGCCACC GACGCCGACT ACAGCAACAT CGAAAGCGTG
GTCGGCCACG AGTACTTCCA CAACTGGAGC GGCGACCGCG TGACCTGCCG CGACTGGTTC
CAGCTCTCGC TGAAGGAAGG CCTCACCGTC TTCCGCGACC AGGAATTCAG CCAGGATCTG
TGCGCCGACG CCTCGGCCCG CGCCGTCAAG CGCATCGAGG ACGTGCGCGT TCTGCGCACC
GCCCAGTTCC CCGAAGACGC CGGCCCCATG GCCCACCCGG TGCGGCCCGA CAGCTACATC
GAGATCAGCA ACTTCTACAC CGTCACCATC TATGAAAAGG GTGCCGAGGT GGTGCGCATG
ATGCAGACGC TGGTCGGCCG CAAGGGCTTC GAGAAGGGCA TCACGCTCTA CTTCGAGCGC
CACGACGGCC AGGCCGTGAC CTGCGACGAT TTTGCGCAAG CCATTGCCGA CGCCAACCCC
GATTCCGAAC TCGCCCGCCT GCTGCCCCAG TTCAAGCGCT GGTACAGCCA GGCCGGCACG
CCGCGCCTGG CCGCCCACGG CGTGTACGAC GCGCAGAACC GCAGCTACAC CCTGAGCATC
GTCCAGAGCT GCCCACCCAC GCCGGGCCAG CCGACCAAGG AACCCTTCGT CATTCCGGTG
AACATCGGCC TGCTCGACGC CAGCGGGCGC GAACTGCCGC TGCAGCTCGA AGGCGAAACC
GAAGTGACGC GCGGCGCGCC GGGCACGCCC TGCACGCGCA CCGTGGTGCT CTCGCGCGCC
GGCGAGCAGA TCACCTTCGT TGGCCTCGAC GCCGAGCCCG TGCCTTCCAT CCTGCGCGGC
TTCAGCGCGC CGGTGATCCT CGACTTCGAG TACACCGACG CCCAGCTGCT CACCCTGCTG
GCCAACGACC CCGACCCCTT CAACCGCTGG GAAGCCGGCC AGCGCTTGGG CCTGCGCGCC
GCGCTGCAGG GCATTGCCGC GCTGGCCACC GACACCACCC CGGTGCTGAA CGACGCCTAC
CTGGACGCCA TGCGCAGCGT GCTGCGCAAC CCCAAGCTCG ATGCCGCCTT CAAGGAACTG
GTGCTCACGC TGCCTTCGGA AACCTACATC TCCGAGCAGC TCGATGTGGT CGATCCGCAG
CGCGTGCACC TGGTGCGCGA AGCCATGCGC GCGCAGCTGG CCACCGCCCT CTTCCAGGAT
TGGCAACAGG TCTACGAAGA AAACCACGAC ACCGGCGCCT ACACGCCCGA CCCGACCTCG
TCGGGCCGCC GCGCGCTGGC CGGCATGGCG CTCAGCTTCT TGTGCCTGGC GGCGCGCGTT
TCGGGCGACA CCGTGTGGCC CGGCAAGACG CTGCAGCGCT TCAAGGACGC CGGCAACATG
ACCGACCGCT TCAACGCGCT CAACGCGCTG GTGTCGTCGG GCCACACCCT GGCCGCGCAG
GCGCTCGCGC GCTTCCACGC CCTCTTCAAG GACGAGGCGC TGGTCATCGA CAAGTGGTTC
TCGCTGCAGG CCGGCGCGCC CGACCGCGGC GGCGACATCC TGCCGCTGGT CAAGCAGCTG
ATGAAGCACC CGGACTTCTC CATCAAGAAC CCCAACCGCG CCCGCAGCGT GATCTTCAGC
TACTGCAGCG CCAACCCCGG CGCGTTCCAC CGCCCCGACG CGGCCGGCTA CGTGTACTGG
AGCGAGCGCG TCATCGAGCT GGACGCCATC AACCCCCAGG TGGCCGCCCG CCTCGCCCGC
GCCCTCGACC GCTGGAGCAA GCTGGCCGAG CCCTACCGCA GCGCCGCGCG CGAAGCGATT
GCCCGCGTGG CCGCCAAGCC CGACCTGAGC AAGGACACGC ATGAGGTGGT GACGCGTGCG
CTGGCAGGCA ACTGA
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| Protein sequence | MLLQRDAQGQ PIAIRREDYA APAFWIDTVD LTFDLDPAKT RVLNRMQLRR NPDAPAQPLR
LDGDELNLAR VLVNGQGASF RMEGDQLVID GLPDAFELEI FTTCCPIKNT KLMGLFVSED
TFFTQCEAEG FRRITYFLDR PDVMAMYTVT LRAAKAAYPV LLSNGNLVEQ GDLPEGRHFA
KWVDPFKKPC YLFALVAGKL VAREQRITAR NGKEHLLQVY VRAGDLDKTE HAMNSLVNSV
LWDEARFGLP LDLDRFMIVA TSDFNMGAME NKGLNIFNTK YVLANQATAT DADYSNIESV
VGHEYFHNWS GDRVTCRDWF QLSLKEGLTV FRDQEFSQDL CADASARAVK RIEDVRVLRT
AQFPEDAGPM AHPVRPDSYI EISNFYTVTI YEKGAEVVRM MQTLVGRKGF EKGITLYFER
HDGQAVTCDD FAQAIADANP DSELARLLPQ FKRWYSQAGT PRLAAHGVYD AQNRSYTLSI
VQSCPPTPGQ PTKEPFVIPV NIGLLDASGR ELPLQLEGET EVTRGAPGTP CTRTVVLSRA
GEQITFVGLD AEPVPSILRG FSAPVILDFE YTDAQLLTLL ANDPDPFNRW EAGQRLGLRA
ALQGIAALAT DTTPVLNDAY LDAMRSVLRN PKLDAAFKEL VLTLPSETYI SEQLDVVDPQ
RVHLVREAMR AQLATALFQD WQQVYEENHD TGAYTPDPTS SGRRALAGMA LSFLCLAARV
SGDTVWPGKT LQRFKDAGNM TDRFNALNAL VSSGHTLAAQ ALARFHALFK DEALVIDKWF
SLQAGAPDRG GDILPLVKQL MKHPDFSIKN PNRARSVIFS YCSANPGAFH RPDAAGYVYW
SERVIELDAI NPQVAARLAR ALDRWSKLAE PYRSAAREAI ARVAAKPDLS KDTHEVVTRA
LAGN
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