Gene Vapar_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3782 
Symbol 
ID7970942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3999539 
End bp4000177 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID644794369 
Producthypothetical protein 
Protein accessionYP_002945664 
Protein GI239816754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.752159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTCA TTCCACTGCG CCCCGCCCTT GCGGCAGCCG CCGCGCCGGT TCATCTTGTG 
GGCCGGCTGT CGGCCGCACT GCCCGATGCG CACTTCGATG TCGAAGACGA GGACGGCGGG 
ACCTGGCGCT GCCGCCGGGC CGCCAGTTGC CTGCTGCGGC CCGAGGTGGG CGACACCGTG 
CTGCTGTCCG GACCGGACGG AGCCCGGGTG TACCTGATTG CCGTGCTCGA ACAGGCCGAC 
GGCGCGGTCA GCCGCATCGA AACCTCAGGC GCCCTCTCGA TCGAAAGCCC CGGCGACGTG 
CGGCTGTGCA GTGGCGGCGA GCTCCAGATG CACGCCGCGC AATGGAAGCT CCAGGCCGCG 
AGCGGACAGT GCCGCGTCGA CGACCTGCAC TTCACCGGCC AGGCCCTCGA CGCCACGGTG 
GGGCGGCTGC GGCTGGTCGG GCGTGTCTTC GAATCGGTGG CCGATCGCAT CGTGCAGATG 
GCGCGCAACG CGCTGCGCGT GGTGGACGAG ACCGAGCAGG TCCGCGTGGG CCACCTCGAC 
TGCGAAGCCG GCGGCACGGC GCGCCTGCAT GCCCGGCACA CGGTGGTCAC GGCCAGCGAG 
CTCGTGAAGG TCGACGCCGC GCAGATCCAC ATGGGCTGA
 
Protein sequence
MNVIPLRPAL AAAAAPVHLV GRLSAALPDA HFDVEDEDGG TWRCRRAASC LLRPEVGDTV 
LLSGPDGARV YLIAVLEQAD GAVSRIETSG ALSIESPGDV RLCSGGELQM HAAQWKLQAA 
SGQCRVDDLH FTGQALDATV GRLRLVGRVF ESVADRIVQM ARNALRVVDE TEQVRVGHLD 
CEAGGTARLH ARHTVVTASE LVKVDAAQIH MG