Gene Vapar_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3774 
Symbol 
ID7970934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3989905 
End bp3990966 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID644794361 
Productaldo/keto reductase 
Protein accessionYP_002945656 
Protein GI239816746 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCCAACTCGG CCAGAGCGAC CTGCACGTCA CCCCCATCTG CCTGGGCACC 
ATGACCTTCG GCGAACAGGT GGACGAGCCC ACCTCCCACG CCATCCTGAG CCGCTCGCTC
GAGCGCGGCG TCGACTTCAT CGACACGGCC GAGATGTACT CGGTGCCCAC GCGCCAGGAA
ACCTACAGCG TCACCGAAAC CATTATCGGC AACTGGTTTG CGGCCAACCC CGGCGCGCGG
CAGAAGCTCG TGCTCGCCAC CAAGGTGGCC GGCCCGCTGC GCAACACGCC GTGGGTGCGC
GAAGGCGTGG GCATGACGGC GGCCGACATC GTGGCCTCGT GCAACGCGAG CCTCAAGCGG
CTGAAGACCG ACGTCATCGA CCTCTACCAG ATCCACTGGC CCGAGCGCCA CGTGCCGGCC
TTCGGCAACA TCTACTACGA CCCGGCCAAG GAGGTCTCGC AGACCCCGAT CCTGGAGCAG
CTCGAAGCCC TCGGCAGCCT GGTGAAGGCC GGCAAGGTGC GCGCGATCGG CCTGTCGAAT
GAAACGCCCT ATGGTGTGCA CGAGTTCGTG CGGCTGGCCG AGCAGCACGG GCTGCCGCGC
GTGGCCACGG TGCAGAACGT CTACAACCTG GCGAGCCGCG GCGCCGAGAA CGGCCTGGAC
GAGACAATGC ACCGGCTGGG TGTGTCGCTG CTGGCCTATT CGCCGCTGGC CTACGGCCTG
CTCACCGGCA AGTACGACCA GAGCGGCATC ACCGGGCCGG ATGCGCCCCA GGACGCGCGC
ATCACACGCT ACGAATCGGT GCGCAAGCTG CGCTGGGGCC GCCCCGAGGC GCTGAAGGCC
GCGCGCCTGT ACAACCAGCT CGCGCGCGAC AACGGCCTCA CGCCCACGCA GCTTGCGCTG
GCCTTCTGCT ACACCAAGTG GCAGGTGGCA AGCACCATCA TCGGCGTGAC GACGGTGGCG
CAGCTGGACG AAGACATCGA TGCCTACGGC ACCGCGCTCT CGCCCGAGGT GCTGGCCGAG
ATCGACAGGA TCCGGTGGGA GATCCGGGAC CCGGCGGCGT GA
 
Protein sequence
MKKIQLGQSD LHVTPICLGT MTFGEQVDEP TSHAILSRSL ERGVDFIDTA EMYSVPTRQE 
TYSVTETIIG NWFAANPGAR QKLVLATKVA GPLRNTPWVR EGVGMTAADI VASCNASLKR
LKTDVIDLYQ IHWPERHVPA FGNIYYDPAK EVSQTPILEQ LEALGSLVKA GKVRAIGLSN
ETPYGVHEFV RLAEQHGLPR VATVQNVYNL ASRGAENGLD ETMHRLGVSL LAYSPLAYGL
LTGKYDQSGI TGPDAPQDAR ITRYESVRKL RWGRPEALKA ARLYNQLARD NGLTPTQLAL
AFCYTKWQVA STIIGVTTVA QLDEDIDAYG TALSPEVLAE IDRIRWEIRD PAA