Gene Vapar_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3773 
Symbol 
ID7970933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp3989340 
End bp3989831 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID644794360 
ProductybaK/ebsC protein 
Protein accessionYP_002945655 
Protein GI239816745 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAAA AAGCACACGT TTCCGAAACC CCCGCGACGC AGCTGCTGCG AGCGAACAAG 
GTCGCCTTCA CCGAGCATCC GTACGAATAC CTGGAGCACG GCGGCGCGCA GCACAGCGCG 
GCCGTGCTGG GCTTCGATCC CTTCACGGTG GTGAAGACGC TGGTGATGCA GGACCAGGAC 
GCCAGGCCGC TGATCGTGCT GATGCACGGC AACCGCACGG TGTCGACCAA GAACCTCGCG 
CGGCAGATCG GCGCCAAGTC GGTCGAGCCC TGCAAGCCCG AGGTCGCGCA GCGCCACAGC 
GGCTACATGG TGGGCGGCAC CTCGCCCTTC GGCACGCGGC GCGCAATGCC GGTGTACATC 
GAATCGACCA TCCTCGAACT GCCGAGGATC GCGATCAACG GCGGGCGGCG CGGCTACCTC 
GTGGGCATCG ACCCGCAGGT GTGCGTCGCC CTGCTCGGCG CCACGCCGGT GCAGTGCGCG 
CTGGCAGAAT AG
 
Protein sequence
MSKKAHVSET PATQLLRANK VAFTEHPYEY LEHGGAQHSA AVLGFDPFTV VKTLVMQDQD 
ARPLIVLMHG NRTVSTKNLA RQIGAKSVEP CKPEVAQRHS GYMVGGTSPF GTRRAMPVYI 
ESTILELPRI AINGGRRGYL VGIDPQVCVA LLGATPVQCA LAE