Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3772 |
Symbol | |
ID | 7970932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3988656 |
End bp | 3989291 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794359 |
Product | protein of unknown function DUF205 |
Protein accession | YP_002945654 |
Protein GI | 239816744 |
COG category | [S] Function unknown |
COG ID | [COG0344] Predicted membrane protein |
TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCTTTC ATCTGCCGTC TTTCATCGCC ATCGTGGCTT CGTACCTGAT CGGCTCGCTG TCCTTTGCGG TCATCGTGAG CAAGGCGCTC GGCATGGCCG ATCCGCGCAG CTACGGCAGC GGCAACCCCG GTGCCACCAA CGTGCTGCGC TCGGGCAACA AGGGCGCGGC GCTGGCCACG CTGCTGCTCG ATGCGCTCAA GGGCTGGCTG CCGGTGTTCC TGATCCGCCA TTTCGGCGCC CAGTGGGGCC TGGGCGAAGG CGTGGCCGCG CTGGCCGGCC TGGCGGCCTT CCTGGGCCAC CTCTACCCCG TGTTCTTCGG CTTCCAGGGC GGCAAGGGCG TGGCCACGGC GGCCGGCGTG CTGGTGGGCA TCGCGCCCTG GCTGGGGCTC GCGACCGGCG CCACCTGGCT GATCATCGCG GTGTTCTTCC GCTATTCGTC GCTGTCGTCG CTGGTGGCGG CCTTCTTTGC GCCGGCCTAT TACCTGCTGG GCGGCAATAT TGCGTGGCCG CTCGACCGCA CGGTGCTGAT TGCGATCATC ATCATGAGTC TGCTGCTGGT CTGGCGGCAC CGCGAGAACA TCCGCCGGCT CGCGGCCGGC ACGGAGTCGA AACTCGGCTC GAAGAAAAAG GCTTGA
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Protein sequence | MSFHLPSFIA IVASYLIGSL SFAVIVSKAL GMADPRSYGS GNPGATNVLR SGNKGAALAT LLLDALKGWL PVFLIRHFGA QWGLGEGVAA LAGLAAFLGH LYPVFFGFQG GKGVATAAGV LVGIAPWLGL ATGATWLIIA VFFRYSSLSS LVAAFFAPAY YLLGGNIAWP LDRTVLIAII IMSLLLVWRH RENIRRLAAG TESKLGSKKK A
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