Gene Vapar_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3772 
Symbol 
ID7970932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3988656 
End bp3989291 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID644794359 
Productprotein of unknown function DUF205 
Protein accessionYP_002945654 
Protein GI239816744 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCTTTC ATCTGCCGTC TTTCATCGCC ATCGTGGCTT CGTACCTGAT CGGCTCGCTG 
TCCTTTGCGG TCATCGTGAG CAAGGCGCTC GGCATGGCCG ATCCGCGCAG CTACGGCAGC
GGCAACCCCG GTGCCACCAA CGTGCTGCGC TCGGGCAACA AGGGCGCGGC GCTGGCCACG
CTGCTGCTCG ATGCGCTCAA GGGCTGGCTG CCGGTGTTCC TGATCCGCCA TTTCGGCGCC
CAGTGGGGCC TGGGCGAAGG CGTGGCCGCG CTGGCCGGCC TGGCGGCCTT CCTGGGCCAC
CTCTACCCCG TGTTCTTCGG CTTCCAGGGC GGCAAGGGCG TGGCCACGGC GGCCGGCGTG
CTGGTGGGCA TCGCGCCCTG GCTGGGGCTC GCGACCGGCG CCACCTGGCT GATCATCGCG
GTGTTCTTCC GCTATTCGTC GCTGTCGTCG CTGGTGGCGG CCTTCTTTGC GCCGGCCTAT
TACCTGCTGG GCGGCAATAT TGCGTGGCCG CTCGACCGCA CGGTGCTGAT TGCGATCATC
ATCATGAGTC TGCTGCTGGT CTGGCGGCAC CGCGAGAACA TCCGCCGGCT CGCGGCCGGC
ACGGAGTCGA AACTCGGCTC GAAGAAAAAG GCTTGA
 
Protein sequence
MSFHLPSFIA IVASYLIGSL SFAVIVSKAL GMADPRSYGS GNPGATNVLR SGNKGAALAT 
LLLDALKGWL PVFLIRHFGA QWGLGEGVAA LAGLAAFLGH LYPVFFGFQG GKGVATAAGV
LVGIAPWLGL ATGATWLIIA VFFRYSSLSS LVAAFFAPAY YLLGGNIAWP LDRTVLIAII
IMSLLLVWRH RENIRRLAAG TESKLGSKKK A