Gene Vapar_3769 details

Gene Information

• Locus tag: Vapar_3769
• ID: 7970929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3987150
• End bp: 3987635
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644794356
• Product: putative nucleotide-binding protein
• Protein accession: YP_002945651
• Protein GI: 239816741
• COG category: [S] Function unknown
• COG ID: [COG1666] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCTT TCGATACCGT CTGCGAGCCC AATCTGCCCG AAGTGAAGAA TGCGGTCGAA 
AACACCGCCA AGGAAATCGC AACGCGCTTC GATTTCAAGG GCACGGCCGC CGCCGTCGAG 
CTCAAGGACA AGGAAATCAC CATGATCGGC GACGCCGAGT TCCAGCTCGT GCAGGTCGAG 
GACATCCTGC GCGCCAAGCT CACCAAGCGC AGCGTCGACG TGCGCTTCCT CGACAAGGGC 
GACGTTCAGA AGATCGGCGG CGACAAGGTC AAGCAGGTCA TCAAGGTCAA GAGCGGCATC 
GAGTCCGAGC AGGCCAAGAA GATCACCCGC ATCATCAAGG ACAGCAAGCT CAAGGTGCAG 
GCGGCCATCC AGGGCGACGC GGTGCGCATC ACCGGCGCCA AGCGCGACGA CCTGCAGGCG 
GCCATGGCAC TCATCAAGAA AGACGTGCCC GACATGCCGC TGTCTTTCAA CAACTTCCGC 
GACTGA 

 

Protein sequence

MPSFDTVCEP NLPEVKNAVE NTAKEIATRF DFKGTAAAVE LKDKEITMIG DAEFQLVQVE 
DILRAKLTKR SVDVRFLDKG DVQKIGGDKV KQVIKVKSGI ESEQAKKITR IIKDSKLKVQ 
AAIQGDAVRI TGAKRDDLQA AMALIKKDVP DMPLSFNNFR D