| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3768 |
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| Symbol | |
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| ID | 7970928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3986054 |
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| End bp | 3987106 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794355 |
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| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
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| Protein accession | YP_002945650 |
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| Protein GI | 239816740 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
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| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTGG AGAACAACGT CCCGCTGCAG CCGTACAACA GCTTCGGCAT CGTCGCGCGC
GCGCAGAACC TCGCGCGCAT CGCCAGCGAG GCGGACGTGG CCGAGCTGCG GGCCAACCCC
CGCTGGCGCG ATGCGCCGCG CTTCGTGCTG GGCGGCGGCA GCAACATCGT GCTCACCGGC
GACGTCAAGC CGCTGGTGCT GAAGGTCGAG ATCAAGGGGC TGCGGCTGGT CGAGGAAACC
CCGCGCGCCT GGATCGTGGA GGCCGGCGCG GGCGAAATCT GGCATGACGC GGTGCAATGG
ATGCTCGAGC ACGGCTACCC GGGGCTCGAG AACCTGGCGC TCATTCCGGG CACCGTGGGC
GGCGCGCCGG TGCAGAACAT CGGCGCCTAC GGCGTCGAGC TGCAGGACCG CTTCGATTCG
CTCGATGCCA TCGACCTGGA CACCGGGCGC GGTTTCACGC TCGACGCCGC GCAGTGCGCC
TTCGGCTACC GCGACTCGGT GTTCAAGCAT GTGCGCAGCG GCCCCAACGA CTTCGGCCTG
TCGGGCCGGG CGCTGATCAC CCGCGTGCGC TTTCGCCTGC CCAAGCCCTG GAAAGCCGTG
GTCGGCTACC TCGACCTCGA GCGCAAGATG GAAGAAACCG GCAACTTCAC GCCCAGCGCC
ACCGATGTGT TCGACTGGGT CTGCGCCATC CGCCGCGCCA AGCTGCCCGA CTGGCGCGTG
CTCGGCAACG CCGGCAGCTT CTTCAAGAAC CCCACGGTCA CGCCCGAGCA GTGCGCCGAC
ATCATTGCGC GCGACCCCAA GATCGTGCAC TACCCGATGG ACGACGGCAG CATCAAGCTC
GCGGCCGGCT GGCTCATCGA CGCCTGCGGC TGGAAGGGCA AGTCGGTCGG CAATGCCGGC
GTCTACGAAC GGCAGGCGCT GGTGCTGGTG AACCGCGGCG GCCTCGAGAA CCCGGTCACG
GGCGGCGAGG TCATGACCCT GGCCAAGGCC ATCCAGACCA GCGTGTACGA GCGCTTCGGC
ATCCGGCTGG AGCCGGAGCC GGTGGTCGTC TGA
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| Protein sequence | MIVENNVPLQ PYNSFGIVAR AQNLARIASE ADVAELRANP RWRDAPRFVL GGGSNIVLTG
DVKPLVLKVE IKGLRLVEET PRAWIVEAGA GEIWHDAVQW MLEHGYPGLE NLALIPGTVG
GAPVQNIGAY GVELQDRFDS LDAIDLDTGR GFTLDAAQCA FGYRDSVFKH VRSGPNDFGL
SGRALITRVR FRLPKPWKAV VGYLDLERKM EETGNFTPSA TDVFDWVCAI RRAKLPDWRV
LGNAGSFFKN PTVTPEQCAD IIARDPKIVH YPMDDGSIKL AAGWLIDACG WKGKSVGNAG
VYERQALVLV NRGGLENPVT GGEVMTLAKA IQTSVYERFG IRLEPEPVVV
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