Gene Vapar_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3765 
Symbol 
ID7970925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3983300 
End bp3983626 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content63% 
IMG OID644794352 
Productprotein of unknown function DUF1255 
Protein accessionYP_002945647 
Protein GI239816737 
COG category[S] Function unknown 
COG ID[COG3123] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGA CTACCGACAC TCTCAACAGC GCCGCAGTGG CGACCAAGGC CAATGTGTAT 
TTCGACGGCA AGTGCGTGAG CCACAGCCTC ACGCTGGCCG ACGGCACCAG GAAATCGGTC
GGCGTGATCC TTCCGTCCAC CCTGACCTTC AACACCGGCG CGCCCGAGAT CATGGAAGGC
ACCGCCGGCA GCTGCGAGTA CCAGCTGGCG GGAACCACCG AATGGATCGC CTCGGGCGCC
GGCCAGAAGT TCAGCGTGCC GGGCAATTCG AGCTTCCAGA TCCGGGTCAC TGGCGAGCCC
TACAGCTACA TCTGCCACTT TGGATAA
 
Protein sequence
MTTTTDTLNS AAVATKANVY FDGKCVSHSL TLADGTRKSV GVILPSTLTF NTGAPEIMEG 
TAGSCEYQLA GTTEWIASGA GQKFSVPGNS SFQIRVTGEP YSYICHFG