| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3760 |
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| Symbol | |
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| ID | 7970920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3979320 |
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| End bp | 3979805 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794347 |
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| Product | Colicin V production protein |
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| Protein accession | YP_002945642 |
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| Protein GI | 239816732 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0367363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCCTGC TCGACTGGAT CGCCGTCACG CTCGTCGTCG TGTCGATGCT GTTCGGCCTG
GTGCGCGGCC TGGTGTTCGA GGTGATTTCG CTGGTGGGCT GGGTGGCTGC ATTCATTGCC
GCCCAGTGGC TGGCGTCGGA TGTGGCGGCC TGGCTGCCCT TCGGCGACCC GCAGGCCACC
TGGCGCTATC CGCTGGCCTT CGTGCTGGTG TTCGTCGGGG TGGCGTTCGG CGTGGGCCTG
GTGGCGGCGC TGACGCGAAA GCTGATTGCG GCTGTCGGCC TCAGGCCGGT GGACCGGATA
TTGGGTGGGG CCTTCGGGGC GGCGCGGGGT GTGGTTGCCC TGCTCGTGCT GGCGGTCATT
GTTCATTTGC TGGCGTTGAG CGACAGTGCC TGGTGGCACG AATCGCACAG CGCCAATGTT
CTCGATGCGG CATTGCAGGG CCTGAAACCC GCGCTGCCTG AAAAGTTGGC AAGCTACCTG
CCCTGA
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| Protein sequence | MALLDWIAVT LVVVSMLFGL VRGLVFEVIS LVGWVAAFIA AQWLASDVAA WLPFGDPQAT
WRYPLAFVLV FVGVAFGVGL VAALTRKLIA AVGLRPVDRI LGGAFGAARG VVALLVLAVI
VHLLALSDSA WWHESHSANV LDAALQGLKP ALPEKLASYL P
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