Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3756 |
Symbol | |
ID | 7970913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3973450 |
End bp | 3974691 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794340 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_002945638 |
Protein GI | 239816728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0103395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCCGC TGAATCTCGC GCTCTTCGAT GCACTTGCGG CGGGCTTTGC TCCCTCGCCC GCGGTGTTGC AGCTGGCGTC GGCCATCGCG CTGGGTTCGT CGTGGGCGTG TGCAGCGGTT CTGGCCTGGG CCGCGTGGCG GCGAGCTGCG CAGCGGCCTT GCGTGCTGGC GGTGCTGGCC GCCGGAGGAG CGGCTTCCCT GGTCTCGCAG GAGATCGCTG CCTCCGTGGG CATGCCCCGT CCCTTCATGA TGGGGCTGAG CCCTGCGCAC GTTCCCCACG GCCTGCGCGC GGGACTGCCC AGCACGCATG CTTCTGTGAT GTTCACCATG GCCTTCGTGC TGCTGCTGCG GCGCCCGATG CGCGACGTCG GGCTCATCAT TCTTGCCGCC GCCGTGGCCA CGGGCTGGGC TCGCATCCAT GTCGGCATTC ATTTTCCGTT CGATGTCGCG GCGGGTGCGC TGCTGGGTGC GGCCATTGCC GCGGCGCTGT TTGCGATGCA GGCGATTGCG CTGAGGCTCG CGCCCAAGGC TGCAGCAGCC CTGGCGCGGC CGTTGCGCGC CCTGGCCGAC GGCAGGGCCG GGCCATGCCT GGTGATGGTG TTCGTGCTCG TTGCCGCGTG GGTCGGCTCG AATACACCCG GCATGGTCGG GCCGGGCATG CTGGAAGAAG ACGGGCCGGT CGAGAAAGGC ACGGTGCTCT TGTACCTGGC CGCGGTGCTT TGCCTGCCGA TGGTTCGTAT GGCCTCTCTC TCGCGCCTGG ACCGCACGGC CATCGGCGTC CTGCTTCTTG CCTTTGCAGC GCGCGAGGCC GATTGGCACC TGGCGCATTT CGGCGCCGCC GGCCTGCTCG ACGCGCCCCT TCCGCGGGTG CTTGCCGGTG CAGCCATCCT CGCGCTCATT GCCACCGCCG CCGGATGGCT GGCCAGGCGC GCATGGTCGG CCAGCCGCGC CATGCGCTCC TGGCGCCAAT GGCGCCCGGA AGCCGCCACC TCGCTGACCT TCGTTGCGGT GATCGGGGCC GCGGTCATCC TCGACCAGTT GCCCGCTTCG CTCGCCGGAC AGCAGCCGGA CCTGCTCGCC GTGGGTTCTT CTTCCGCGGC CTTTCGCAGC TACCTGATGC ACAGCTTCGA GGAAATCCTG GAGCTGGCCC TGCCGGTGCT GGCGCTGCTG GCCATCCTGC AGGCGAGACT GGGCGGAAGC CAGGATCCGG CTCCCGGCGG CATCGAGCGC TCGTACGCAT AG
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Protein sequence | MHPLNLALFD ALAAGFAPSP AVLQLASAIA LGSSWACAAV LAWAAWRRAA QRPCVLAVLA AGGAASLVSQ EIAASVGMPR PFMMGLSPAH VPHGLRAGLP STHASVMFTM AFVLLLRRPM RDVGLIILAA AVATGWARIH VGIHFPFDVA AGALLGAAIA AALFAMQAIA LRLAPKAAAA LARPLRALAD GRAGPCLVMV FVLVAAWVGS NTPGMVGPGM LEEDGPVEKG TVLLYLAAVL CLPMVRMASL SRLDRTAIGV LLLAFAAREA DWHLAHFGAA GLLDAPLPRV LAGAAILALI ATAAGWLARR AWSASRAMRS WRQWRPEAAT SLTFVAVIGA AVILDQLPAS LAGQQPDLLA VGSSSAAFRS YLMHSFEEIL ELALPVLALL AILQARLGGS QDPAPGGIER SYA
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