Gene Vapar_3756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3756 
Symbol 
ID7970913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3973450 
End bp3974691 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID644794340 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_002945638 
Protein GI239816728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCGC TGAATCTCGC GCTCTTCGAT GCACTTGCGG CGGGCTTTGC TCCCTCGCCC 
GCGGTGTTGC AGCTGGCGTC GGCCATCGCG CTGGGTTCGT CGTGGGCGTG TGCAGCGGTT
CTGGCCTGGG CCGCGTGGCG GCGAGCTGCG CAGCGGCCTT GCGTGCTGGC GGTGCTGGCC
GCCGGAGGAG CGGCTTCCCT GGTCTCGCAG GAGATCGCTG CCTCCGTGGG CATGCCCCGT
CCCTTCATGA TGGGGCTGAG CCCTGCGCAC GTTCCCCACG GCCTGCGCGC GGGACTGCCC
AGCACGCATG CTTCTGTGAT GTTCACCATG GCCTTCGTGC TGCTGCTGCG GCGCCCGATG
CGCGACGTCG GGCTCATCAT TCTTGCCGCC GCCGTGGCCA CGGGCTGGGC TCGCATCCAT
GTCGGCATTC ATTTTCCGTT CGATGTCGCG GCGGGTGCGC TGCTGGGTGC GGCCATTGCC
GCGGCGCTGT TTGCGATGCA GGCGATTGCG CTGAGGCTCG CGCCCAAGGC TGCAGCAGCC
CTGGCGCGGC CGTTGCGCGC CCTGGCCGAC GGCAGGGCCG GGCCATGCCT GGTGATGGTG
TTCGTGCTCG TTGCCGCGTG GGTCGGCTCG AATACACCCG GCATGGTCGG GCCGGGCATG
CTGGAAGAAG ACGGGCCGGT CGAGAAAGGC ACGGTGCTCT TGTACCTGGC CGCGGTGCTT
TGCCTGCCGA TGGTTCGTAT GGCCTCTCTC TCGCGCCTGG ACCGCACGGC CATCGGCGTC
CTGCTTCTTG CCTTTGCAGC GCGCGAGGCC GATTGGCACC TGGCGCATTT CGGCGCCGCC
GGCCTGCTCG ACGCGCCCCT TCCGCGGGTG CTTGCCGGTG CAGCCATCCT CGCGCTCATT
GCCACCGCCG CCGGATGGCT GGCCAGGCGC GCATGGTCGG CCAGCCGCGC CATGCGCTCC
TGGCGCCAAT GGCGCCCGGA AGCCGCCACC TCGCTGACCT TCGTTGCGGT GATCGGGGCC
GCGGTCATCC TCGACCAGTT GCCCGCTTCG CTCGCCGGAC AGCAGCCGGA CCTGCTCGCC
GTGGGTTCTT CTTCCGCGGC CTTTCGCAGC TACCTGATGC ACAGCTTCGA GGAAATCCTG
GAGCTGGCCC TGCCGGTGCT GGCGCTGCTG GCCATCCTGC AGGCGAGACT GGGCGGAAGC
CAGGATCCGG CTCCCGGCGG CATCGAGCGC TCGTACGCAT AG
 
Protein sequence
MHPLNLALFD ALAAGFAPSP AVLQLASAIA LGSSWACAAV LAWAAWRRAA QRPCVLAVLA 
AGGAASLVSQ EIAASVGMPR PFMMGLSPAH VPHGLRAGLP STHASVMFTM AFVLLLRRPM
RDVGLIILAA AVATGWARIH VGIHFPFDVA AGALLGAAIA AALFAMQAIA LRLAPKAAAA
LARPLRALAD GRAGPCLVMV FVLVAAWVGS NTPGMVGPGM LEEDGPVEKG TVLLYLAAVL
CLPMVRMASL SRLDRTAIGV LLLAFAAREA DWHLAHFGAA GLLDAPLPRV LAGAAILALI
ATAAGWLARR AWSASRAMRS WRQWRPEAAT SLTFVAVIGA AVILDQLPAS LAGQQPDLLA
VGSSSAAFRS YLMHSFEEIL ELALPVLALL AILQARLGGS QDPAPGGIER SYA