| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3755 |
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| Symbol | |
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| ID | 7970912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3972036 |
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| End bp | 3973331 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794339 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002945637 |
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| Protein GI | 239816727 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0601129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAACT CCACCGAAGA CCGGATCACC GAAGCCGCCA TCGTGGAGGC CGCCCACGCG
CTGCGCGCGC CGGCCGTTCG AATGCTCGAG CAGCTCGTTG CGCATCCTTC GCTGCTGGGA
CACGAGCAAG GCGCGCAAGC CTTCATGGCC GAGACCTTCA CGAAGCTGGG CCTGCGCGTG
CACCAGTTCG AGATCGACGA GCAGAAGATC CGCCAGCATC CGGGCTACTC GCCCTCCATC
GTGCCGTACG AAGGGCGCAC CAACGTCGTG GGCATTCACC AGCCCCGCGG GCCGCAGAAG
GGCCGATCGC TGATCTTCAA TGGCCACATC GACGTGGTGC CGACCGGCGC CGAGCTGCTC
TGGAAGCACC CGCCCTTCCA ACCCGTGATC GAGGGAGACC GGCTCTACGG CCGCGGCGCG
GCCGACATGA AGGCCGGCGT CGCGGCCTAC ACGATGGCGT ATGCGGCGCT GCAGTCGCTC
GGGCTCGAAC CGGCATCGCC GGTGTTTTTT CAGTCAGTGG TGGAAGAGGA GTGCACGGGC
AACGGCGCAC TGGCCTGCCT GGTCGAGGGC TATCGCGCCG ACGCGGCCAT CATCCCCGAG
CCGCTCGGCG GCGTGATGAC CTGCCAGATG GGCGTGCTGT GGTTCGCGCT CGAGGTGCTG
GGCAAGCCGG TGCATGCTTC GGTGGCCCAG ACCGGTGTCG GCGCGATCGA CTTCTCGCTG
TATCTTTTCT CTGAACTCAA GAAGCTCGAG CAGCGCTGGA ACGAGCCCGC CAACCGCTAT
CGCAGCTACG CGCACCATGC GCATCCGATC AACTTCAACC TCGGAAAGAT CCAGGGCGGC
GAGTGGGCTT CGTCGGTGCC CTCGGCCTGC CGCAGCGACA TTCGCATCGG CTTCTATCCC
GACATGAACG TGGCCCGCGC CAAGGCCGAG GTCGAGGCCG TGCTGGCCGC CGCCTACGCT
GCGCATCCGG CCCGCGAGAG CCTGCGCTAC CGGCTGATCT ACGAAGGCTT CCAGGCCGAC
GGCTTCGACC TCGGCCTGGA TTCGCCGATC GTCTCCGAGC TCTCGAAGTG CCACCAGGAC
ATCGTCGGGC AGGCACTCGA ACCCACGGCC TTCACGGGCA CGACGGACGC GAAGTTCTTC
AACATCTATG GGCAGACGCC CGCGGTCTGC TACGGCCCCA CGGGCTCCAG CATCCACGGC
ATCGACGAGT GGGTTTCCAT CGACAGCCTG GTGCAGGTGA GCGCCGTGCT GGCGGTGTTC
ATGGCGCGCT GGTGCGGCGT CGAGCGCGTC GATTGA
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| Protein sequence | MPNSTEDRIT EAAIVEAAHA LRAPAVRMLE QLVAHPSLLG HEQGAQAFMA ETFTKLGLRV
HQFEIDEQKI RQHPGYSPSI VPYEGRTNVV GIHQPRGPQK GRSLIFNGHI DVVPTGAELL
WKHPPFQPVI EGDRLYGRGA ADMKAGVAAY TMAYAALQSL GLEPASPVFF QSVVEEECTG
NGALACLVEG YRADAAIIPE PLGGVMTCQM GVLWFALEVL GKPVHASVAQ TGVGAIDFSL
YLFSELKKLE QRWNEPANRY RSYAHHAHPI NFNLGKIQGG EWASSVPSAC RSDIRIGFYP
DMNVARAKAE VEAVLAAAYA AHPARESLRY RLIYEGFQAD GFDLGLDSPI VSELSKCHQD
IVGQALEPTA FTGTTDAKFF NIYGQTPAVC YGPTGSSIHG IDEWVSIDSL VQVSAVLAVF
MARWCGVERV D
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