| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3749 |
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| Symbol | |
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| ID | 7970906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3968055 |
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| End bp | 3968795 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794333 |
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| Product | Thioesterase |
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| Protein accession | YP_002945631 |
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| Protein GI | 239816721 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.501691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCGA GCGTCTCGCT GCTGTGCCTG CCTTGTGCGG GTGCCAGCGC AACGATGTAC
CTGCGCTGGC GGCGGCTGCT GCCGCGCTGG GTCCACATCG TGCCCGTGGA GCTGCCCGGC
CGCGGTGGCC GGCTGTCCGA GCGGCTGGTC CGGAACTTCG ATGAGCTCGT CGCGCAGGTC
TGCGCGGAGC AGGTCGAGGC GCTGCGCGGC GAGTTCGCGA TCTTCGGCCA CAGCATGGGA
TCGTTGCTGG CCTACGGCAT CACCCGCCGG CTGCGGTCGA TGGGGCGCCC GTTGCCGCTT
GCGCTGCTGG CCTCCGGCAG CTGCGCACCT TCGCGGCGCG ATCCCGCGCG CTTCGCCGGC
AAGACCGATG ACGCATCGCT CGCGGCCGAG TTGCGCAAGC AGGGCGGAAC GCCCGAAGAA
GCCTTCGCAA GCGCGGAACT CATGCGCATC ACGCTCGACA TGCTCGGTGC CGACTACCGC
GTGTGCGAGA GCTTCCGGTA CCGCGAAGAA GAAGCGCCGC TCCCCATGCC CGTGCATGTC
TTTGCCGGGC GCGAGGACGA CATCGACGCG GCATCCGTCC ATGCATGGTC GGCCGAGGCG
GGCGGTGTCT TCACGCTCGA CTGGTTCGAC GGCGGCCACT TCTTCATCCG GCAGCACGAA
ACAGCATTCC TGGCCGCACT CATCGAGCGG CTTGGCCAGG CCGTTGCAGG AGAGCGCCAT
GCGCCCCGTG TCCTGGCCTG A
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| Protein sequence | MDASVSLLCL PCAGASATMY LRWRRLLPRW VHIVPVELPG RGGRLSERLV RNFDELVAQV
CAEQVEALRG EFAIFGHSMG SLLAYGITRR LRSMGRPLPL ALLASGSCAP SRRDPARFAG
KTDDASLAAE LRKQGGTPEE AFASAELMRI TLDMLGADYR VCESFRYREE EAPLPMPVHV
FAGREDDIDA ASVHAWSAEA GGVFTLDWFD GGHFFIRQHE TAFLAALIER LGQAVAGERH
APRVLA
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