| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3746 |
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| Symbol | |
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| ID | 7970903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3961048 |
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| End bp | 3966378 |
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| Gene Length | 5331 bp |
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| Protein Length | 1776 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794330 |
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| Product | amino acid adenylation domain protein |
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| Protein accession | YP_002945628 |
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| Protein GI | 239816718 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA ACACACAGGC GCAGCAGGCG CCGATCTCGC CGCGCCCAAC GAATTTCGTG
GCACACCTTC GCGCGCTGGC CGACGCGCGG CGCGACGACA TCTGGCTCAC CGTCGTGAGC
GCGGTGGATG GCACGGAGCG CGCGGAGCCG ATCAGCTACG GCACCTTCGA GCGCCGCGTG
CGCGCGCTTG CGGCCCGGCT GCAGCAGCAG TTCGCCAAAA AAGGCGAACG CGCCCTCGTC
ATGCTGGACA ACGGCGACCA CTATGCGGTG AGCATGCTGG CCTGCTTCTA CGCGGGCGTG
ATTGCGGTGC CGGTGTTCCC GCCGGAATCG GCGCGCCCGC AGCACCTCGC ACGGCTGACC
GGCATTGCCG CCGATTCGCA GGCGCGCTGC GTGCTGACTT CCGAGGCCAT GGCGCGCGCG
ATGAATGCAG CGAGCGCGGG CCTGCGCCAG TTCGGCGATG CGCACATCGT TGCGGTCGAT
ACCGTGGACA TCTCGCTCGC CGATGCGTGG ACGCCCTTCG AGCCGGCGGA TGGCGACGTC
GCCTTCCTGC AATACACCTC GGGCTCCACC TCGGCGCCCA AGGGCGTGAT CGTGACGCAC
GGCAACCTGA TGGCCAACGA GGAGGCGATC CAACGCAGCA TGGGTGTCGG CCCGGGCGAC
AGCTTCGTTT CGTGGGCGCC GCTCTATCAC GACATGGGCC TGATCGGCGG ATTGCTGCAG
CCGCTCTACA GCGGCATTCC GCTGGTGCTC ACGTCGCCGG GCTACTTCCT GGAGCGCCCG
GTGCGCTGGC TCGAACTGAT CTCGCGCCAT CGCGCGACGC TCAGCGGCGG CCCCGACTTT
GCCTACCGCC TGTGCCTGGA ACGGGTGAAG GATGCGCAAC TGGCCCCGCT CGACCTGTCG
AGCTGGCGCG TGGCCTACAC CGGCGCCGAA CCCGTGCGCG CCGACACCGA AATCGAATTC
ATCTCGCGCT TCGCATCGGC GGGTTTCGAT GCGGCAGCCG TCTATCCCTG CTACGGCCTC
GCCGAAGCGA CGCTCTTCGT CACCGGCGGC CGCCGGGGCG GCGGCCTGGT CGCGCCCACG
TTTTCCGCCA CCGGCCTCGC CAGCGGGGTG GGAGCGCCTG CGGACGAGGG CGCGGCGCTG
GTCGGCTGCG GCAACGTCGC GCCCGGCCAT CGCATCGAGA TCGTCGATGC CGAATCGCTC
TCGGCCGCAG CCCCCGGAAA GATCGGCGAG ATCTGGACCT GCGGCCCGAG CATCGGCCAC
GGCTACTGGG GCAAGGAGCG CGAAACCCGC GAGACCTTCG TCGAGCGGAA CGGCCAGCGC
TGGCTGCGCA CCGGCGACCT CGGCTTCATG CACGAAGGCC AGCTCTACGT CACCGGCCGC
ATCAAGGACC TGATCATCGT CCGCGGCCAC AACATCTACC CGCAGGACAT CGAGCGGCTC
ATCGAGGCCG AGGTCGATGC GGTGCGCAAG GGCCGCGTCG CGGTCTTCGC CACGCAGGGG
CCGGGCGGCG AAGGCATCGG CGTGGCCGCC GAGGTGTCGC GCAGCATGCA GAAGCTGGTG
CCGGCCGCGG TGCTGGTCGA TGCGCTGGGC GCCGCCGTGA GCGAGGTGTT CGGCGAGACG
CTGTCGGTTG TGCTGCTGCT CAACCCCGGC GGCATGCCCA AGACCACCAG CGGCAAACTG
CAGCGCAGTG CCTGCCGCGC GGGCTGGCTC GACGGCAGTG CCGATGCCTA TGCCGTCTAC
CAGCACGGCG CCTTCGTGCG CGGAGGCCTG GGCGAAGCCG TTGCCGAGGC ACCGCTCGAC
GAAGTCGAGC AGGCCGTCGC CGCCATCTGG CGCGAGGTCT GCAAACACGG CGACGACCGC
CCGCTTGGCC GCGATGCCCA CTTCTTCAAC CGCGGCGGCA GCTCCCTCAC CGCCACGCAG
GCGGCCGCGC GCATCGGCGC GCGCTGGCAG ATCGACTTTC CCGCACGCAG GCTCTTCGAG
CAGCCGCGCC TTCGCGACTG CGCATCGGCC ATCCGCGAAC TGCAGCTGCA GGGCGTGCGC
CCGCAGCCCG CGCCAATCGC CGTGCTCTCC GCGGAGCGGC GGCTGTTGCC ATTGCCGCTC
TCGCACGCGC AGGAGCGCCA GTGGTTCCTC TGGCAGATCG ATCCCGAGAG CGCGGCCTAC
CACGTGAGCG GCGCGCTGCG CCTGGCCGGC GCGTTGCGGG TCGATGCCCT GCAAGCAGCG
TTCGACGGTC TGGTGGCGCG CCACGAATCG CTGCGCACGG TCTTCAGCGC CGGTGCCGAT
GGCAGCGTGG AGCAATGGAT CAGGCCGGGC GGCTCCGTGC CGCTGGCGCT GGTCGACCTG
CGCGGCGCCG AAGCCGAAGC CGATGCCCGA TTGGACGAAG CCACGCGGCG CCTCAAGGCC
CAGCCCTTCG ACCTCACGCA GGATCCGCTG CTGCGCGCCG CGCTGATCCG CACCGCCGAC
GAGGTGCATG TGCTCGCCGT GGTGATGCAT CACATCGTGT CCGATGGCGC CTCGATGCAG
CTGCTGATCG ACGAACTGGC CGCGGGCTAC GCCGCGCACC TGAAGGGCGA CACCGTGCGC
CTGGCCGCGC CGCGCATCCA GTACGCCGAC CATGCGCTCT GGCAGCGCGA GTGGCTGGCG
GCGGGCGAGG GCGAGCGGCA ACTGGCCTGG TGGCGCACGC AGCTCGGCGA CACGCACACC
GTGCTCGAGC TGCGCACCGA CCACCCGCGC AAGCCGCAAG CCGGCTACGG CGCTGCGAGC
CATGCCTTCG AGCTTCCGGC GAGCCTTCTC GCGCGGCTGC GAAAGGCCGC GGACGGCGGT
GGCGCCACGC TCTTCATGGT GCTCCTGGCC GGCTTCCAGG CGCTGCTGCA CCGCTACACG
GGCCAGGAAG ACATCCGCAT CGGCGCACCG TTTGCCAACC GCAACCGCGT GGAAGCCGAA
GGCGTGGTCG GCCTGTTCGT CAACACGCTG GTGCTGCGCA ACCCGATCCA TGGCCGCCTC
GGTGCATCGC GGGTGCTGGC GCAGGCGCGT GACGCGGTGC TGGGCGCACA GGCGCACCAG
GATGTGCCCT TCGAGCAACT CGTGCAGATG CTGCAGCCCG AGCGCAGCCT GAGCCGCACG
CCGCTGTTCC AGGTGATGTT CAACCACCTG TTCGAGGACT ACCGCTCGCT CGGACAGCTG
CCCGGCATCG CCGCGCAAGA CCATGCGCTG CCCGATCTCG CGGCGCAGTT CGAGCTCACG
CTCGAAGCGC GCGAGCGGCC GGGCGGCCAG CTCTCGCTCG CCCTGATCTA CGCGGCCGAG
CTGTTCGAGC CCGGCACCAT GGCGCGCATG GCCAGCCACT ATGTCGCGGT CCTGCAGGCG
CTGGTCGAGC GTCCCCATCA ACCCATCGGC GACATCGAGC TGCTCGGCGC GCCGGAGCAG
GCCCAACTCG CGCAGTGGGG TGTGAATGGG CACCGCGAGC CGCAGCCCGA GCCGGTGCAC
CGCATGATCG AGCGGCAGGC CCGCATGCAG CCCGATGCCA CTGCGCTGCT GTTCGCCGAC
GAGTCGCTTG GCTTTGCGGA ACTGAACCGC CGCGCCAACC GCCTGGCGCA CCGGCTGATC
GCGCTGGGCG TGAAGCCCGA GGTGCTCGTG GGCATCGCGA TGGAGCGCTC CGTCGAGATG
GTGGTCGCCA TCCTGGGCGT GCTGAAGGCG GGCGGCGCCT ATGTGCCGCT GGACCCCGAA
TACCCCGCCG AGCGCCTGGC CTACATGGTG CAGGACAGCG GCATCGGCCT GCTGCTCACG
CAGCGCAGCG TGGCCTATTG CGTGGCCAAC TGCGTGCCCG ACCGCCGCGC GCTCACGGTG
CTTGAAGTCG ATGCCGCCGA TCTCGGCGCC GAGCCCGAGA GCGATCCGCA GGTCGGCCTG
CACATCGAGA ACCTCGCCTA CGTGATCTAC ACATCGGGCT CGACCGGCAA GCCCAAGGGC
GCGGCCATCC GCCACAGCGC GCTGCACAGC TGCATGGCGT GGATGCAGGG CATCTACAAG
CTCACGCGCG CCGACACCGT GCTGCACAAG GCGCCCTTCG GCTTCGACGT GTCGGTGTGG
GAGCTGTTCT GGCCGATGAC CTCGGGCGCG CGGCTGGTGG TGGCCAACCC CGGCGATCAC
CGCGACCCGG CGCGCCTGGT CGAGCTGATC CAGCGCCACC AGGTCACCAC GCTCAATTTC
GTGCCCTCGA TGCTGCAGGC CTTTCTCGCG CACAAGGGCA TCGAGGCCAG CACGCGCCTG
CGCCACATCA TCTGCGGCGG CGAGGCGATG CCGGCCGAGA CGCAGAAGGA AACGCTCGAG
CGCCTGCACG GCGCGGGCCT GCAGAACCTC TACGGCCCCA CCGAGACCAC CATCCACGTC
ACGCACTGGG CCTGCCGCAA CGATGGCCAG AGCCAGGTGC CCATCGGCAA GCCGATCAGC
CACACCAGCG CCCATGTGCT GGATGCCGAG CTCAACCTCG TGCCGCAGGG CGTGGCGGGC
GAGCTGTACC TGGGCGGCAT CAGCCTCGCG CGCGGCTACC TGAAGCGCGC CGGCCTGAGC
GCCGAGCGCT TCGTGGCCGA TCCGTTCGAC AGCGCTGGCG GCGGGCGGCT CTACCGCACC
GGCGACCTCG TGCGCTGGAA CGGCGAAGGA CAGCTGGAGT ACCTGGGCCG CATCGACCAC
CAGGTGAAGA TCCGGGGCTT TCGCATCGAG CTTGGCGAGA TCGAGGCCGA GCTGCTGGCG
CAGCCCGCCG TGCGCGAAGC CGTCGTGGTC GCCAGGGACG GCCCGGCCGG CGCGCGGCTC
GTCGGCTACC TCGCGCCGCA TGCGGGCGAG GCCATCGACA CCGCGGCGCT GAAAGAGCGG
CTTGCGCAGG TGCTGCCCGA CTACATGGTC CCGCGCGCCT TCGAGGTGCT CGATGCACTG
CCGCTGAACG CCAACGGCAA GGTGGACCGT AAGGCGCTGC CCGAGCCGGC CCTTGCCAGC
GGCCAGGCGT ACGAGGCGCC GCAGGGCCAT GTCGCGCAGA CGGTGGCTGC GGTGTGGTCC
GAGGTGCTGC AGGTCGCGCA GGTTGGCCTG CACGACAACT TCTTCGACCT GGGCGGCCAC
TCGCTGCTGC TGATCCGCGC GCACCGGCTG CTGGAAGACC GGCTGCACAC CGCCATCCCG
GTGGTCAATC TCTTCAAGTA CCCCACCGTC CAATCGCTGG TCCAGTGGCT GGAGCAGGCG
CCCGCGCGCG CCGCCGCATC GGCCAGCGCG GCCGCGGCGA GCGACGACCG GGCGCTGCGC
CAGCGCGCCG CCATGCTTCA ACGCCGCAAA GCGGCAGAGA GAGTCAACTG A
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| Protein sequence | MEKNTQAQQA PISPRPTNFV AHLRALADAR RDDIWLTVVS AVDGTERAEP ISYGTFERRV
RALAARLQQQ FAKKGERALV MLDNGDHYAV SMLACFYAGV IAVPVFPPES ARPQHLARLT
GIAADSQARC VLTSEAMARA MNAASAGLRQ FGDAHIVAVD TVDISLADAW TPFEPADGDV
AFLQYTSGST SAPKGVIVTH GNLMANEEAI QRSMGVGPGD SFVSWAPLYH DMGLIGGLLQ
PLYSGIPLVL TSPGYFLERP VRWLELISRH RATLSGGPDF AYRLCLERVK DAQLAPLDLS
SWRVAYTGAE PVRADTEIEF ISRFASAGFD AAAVYPCYGL AEATLFVTGG RRGGGLVAPT
FSATGLASGV GAPADEGAAL VGCGNVAPGH RIEIVDAESL SAAAPGKIGE IWTCGPSIGH
GYWGKERETR ETFVERNGQR WLRTGDLGFM HEGQLYVTGR IKDLIIVRGH NIYPQDIERL
IEAEVDAVRK GRVAVFATQG PGGEGIGVAA EVSRSMQKLV PAAVLVDALG AAVSEVFGET
LSVVLLLNPG GMPKTTSGKL QRSACRAGWL DGSADAYAVY QHGAFVRGGL GEAVAEAPLD
EVEQAVAAIW REVCKHGDDR PLGRDAHFFN RGGSSLTATQ AAARIGARWQ IDFPARRLFE
QPRLRDCASA IRELQLQGVR PQPAPIAVLS AERRLLPLPL SHAQERQWFL WQIDPESAAY
HVSGALRLAG ALRVDALQAA FDGLVARHES LRTVFSAGAD GSVEQWIRPG GSVPLALVDL
RGAEAEADAR LDEATRRLKA QPFDLTQDPL LRAALIRTAD EVHVLAVVMH HIVSDGASMQ
LLIDELAAGY AAHLKGDTVR LAAPRIQYAD HALWQREWLA AGEGERQLAW WRTQLGDTHT
VLELRTDHPR KPQAGYGAAS HAFELPASLL ARLRKAADGG GATLFMVLLA GFQALLHRYT
GQEDIRIGAP FANRNRVEAE GVVGLFVNTL VLRNPIHGRL GASRVLAQAR DAVLGAQAHQ
DVPFEQLVQM LQPERSLSRT PLFQVMFNHL FEDYRSLGQL PGIAAQDHAL PDLAAQFELT
LEARERPGGQ LSLALIYAAE LFEPGTMARM ASHYVAVLQA LVERPHQPIG DIELLGAPEQ
AQLAQWGVNG HREPQPEPVH RMIERQARMQ PDATALLFAD ESLGFAELNR RANRLAHRLI
ALGVKPEVLV GIAMERSVEM VVAILGVLKA GGAYVPLDPE YPAERLAYMV QDSGIGLLLT
QRSVAYCVAN CVPDRRALTV LEVDAADLGA EPESDPQVGL HIENLAYVIY TSGSTGKPKG
AAIRHSALHS CMAWMQGIYK LTRADTVLHK APFGFDVSVW ELFWPMTSGA RLVVANPGDH
RDPARLVELI QRHQVTTLNF VPSMLQAFLA HKGIEASTRL RHIICGGEAM PAETQKETLE
RLHGAGLQNL YGPTETTIHV THWACRNDGQ SQVPIGKPIS HTSAHVLDAE LNLVPQGVAG
ELYLGGISLA RGYLKRAGLS AERFVADPFD SAGGGRLYRT GDLVRWNGEG QLEYLGRIDH
QVKIRGFRIE LGEIEAELLA QPAVREAVVV ARDGPAGARL VGYLAPHAGE AIDTAALKER
LAQVLPDYMV PRAFEVLDAL PLNANGKVDR KALPEPALAS GQAYEAPQGH VAQTVAAVWS
EVLQVAQVGL HDNFFDLGGH SLLLIRAHRL LEDRLHTAIP VVNLFKYPTV QSLVQWLEQA
PARAAASASA AAASDDRALR QRAAMLQRRK AAERVN
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