| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3733 |
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| Symbol | |
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| ID | 7970890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3931777 |
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| End bp | 3932400 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794317 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002945615 |
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| Protein GI | 239816705 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACA TCGTCCAGGA ACTGCTGGCC CACTATGCGG ACTTGCGCCG GCAGCTGACG
CGCGACCTGC GCGACCCGCA CTACGCGGCG GACATCGCGC AATCCAGCTT CGAGCGCGTG
TATGCGCACG CGCTCAAGAT GAACAACGGC ATCCGCATCG ACGATGCGGC GCCGGACGGC
ACGCAACAAG GCGCCGGCGG CATCGAGTCG CCCCGCGCCC TGCTGTTTCG CGTGGCGCGC
AACCTGTGCG TGGACGATGC GCGCCGCCGC AAGGTGGCGC AGGACTGGGT CGGCACGCAT
TTCAACTCGG GCTCGCGCCA GGTCGCGCCT TCCTGCGAAT TCATCGCGTC CCAGCAGCAG
GTGCTGGCGC GCGTGGTCGA GACGCTCGAA ACGCTGCCGC CCCGCCGGCG CGAAGTGTTC
CTGCTGTTCC GCGCCTACGG ACACACGCGC GCCGAAATCG CGCAGCAACT GAACATCAGC
GAGATGGCGG TCGCCAAGCA CCTGCTGCGC GCCGCCATCG ACTGCTCGCG CGTGTTCGCC
CGGCTGCGTT CGGAGCTGGT CGAGCAGCCG GCCGTCTCGA TGCGCCCGGG CTTCGACGCA
ATGTTCGCCG AAGACTTCGC CTGA
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| Protein sequence | MRDIVQELLA HYADLRRQLT RDLRDPHYAA DIAQSSFERV YAHALKMNNG IRIDDAAPDG
TQQGAGGIES PRALLFRVAR NLCVDDARRR KVAQDWVGTH FNSGSRQVAP SCEFIASQQQ
VLARVVETLE TLPPRRREVF LLFRAYGHTR AEIAQQLNIS EMAVAKHLLR AAIDCSRVFA
RLRSELVEQP AVSMRPGFDA MFAEDFA
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