Gene Vapar_3727 details

Gene Information

• Locus tag: Vapar_3727
• ID: 7970884
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3926603
• End bp: 3927097
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644794311
• Product: methylated-DNA/protein-cysteine methyltransferase
• Protein accession: YP_002945609
• Protein GI: 239816699
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0350] Methylated DNA-protein cysteine methyltransferase
• TIGRFAM ID: [TIGR00589] O-6-methylguanine DNA methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTCA AGAGCAAAGT CATCTACACC TCGCACATCG ACACGCCGCT CGGCGGCATC 
ACGATGGCGG CCACCGACGA AGGCCTGGCG GGCGTCTGGT TCGACCAGCA GCGCCACTGG 
CCCGACACCA CGGGCTGGCA GGCCAGGGAC GACCATCCCG CGCTGGTCGA GGCCGGCGCC 
CAGCTGCGCG ACTACTTCGC GGGCAGGCGC GACAGCTTCG ACGTGAAGCT CGACCTGTCG 
CACGGCACCG CGTTCCAGCA GAGCGTGTGG CAGGCGCTGC TCGCCATTCC GGCGGGCAAG 
ACCATGACCT ACGGCGCGCT GAGCGCGAAC GTGGGCAACC CGGCCGCGGT GCGCGCGGTG 
GGCGCGGCCG TGGGGCGCAA CCCGATCAGC GTGATCGTGC CCTGCCACCG CGTGCTGGGC 
GCCGACGGCT CGCTGACCGG TTACGCTGGC GGGCTCCACC GCAAGACCGC ACTGCTGGAA 
CTCGAAGCGA AATAG 

 

Protein sequence

MKFKSKVIYT SHIDTPLGGI TMAATDEGLA GVWFDQQRHW PDTTGWQARD DHPALVEAGA 
QLRDYFAGRR DSFDVKLDLS HGTAFQQSVW QALLAIPAGK TMTYGALSAN VGNPAAVRAV 
GAAVGRNPIS VIVPCHRVLG ADGSLTGYAG GLHRKTALLE LEAK