| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3726 |
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| Symbol | |
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| ID | 7973959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3924992 |
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| End bp | 3926596 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794310 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002945608 |
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| Protein GI | 239816698 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACCT CACATGCATC CACCGACGCA CTCGAGAGCG ACGCCTGCTA CCTGGCGATG
AAGACGCACG ATGCGCGCTT CGACGGCTCC TTCTTCACCG CGGTGACCTC CACCGGCATC
TACTGCCGGC CGGTCTGCCG CGTGAAGCTG CCGCGGCGCG AGAACTGCCG CTTCTTCCGC
CACGCGGCGC AGGCCGAGGC CGAGGGCTTC CGCCCCTGCC TGCGCTGCCG GCCCGAGCTC
GCGCCGCGGG CGGCGAGCTG GTCGACCGAA GATGCCTCGC GCATCCTCGC GCTGCAGGCC
GCGCGGCTCA TTGACGAGCC CGATGCCTGG TCCGAGGAGG GTCCGGGCGC CGCGCAGATC
GCCGCGCGGC TCGGCGTGAG CGACCGCCAC CTGCGGCGCA TCTTCGAGGC GCAGTTCGGC
GTCTCGCCGC TGCAATACCT GCAGACGCGC CGCCTGCTGG CCGCCAAGCA ATTGATCGCC
GACACGCGCC TGCCGATGAC GCAGGTGGCG CTGGCCAGCG GCTTCGCGAG CGTGCGCCGC
TTCAACGCCG CGTTCCTGGA GCACTACGGC CTCAACCCGA GCGCGCTGCG GCGTGCCGGC
GGCGGCGAGG GCGGCGAGGG CAAGGCCATC GAGGTGCGGC TGGGCTTTCG ACCGCCCTAC
GACGTGGGCG CGATGCTCGG CTTCTTTGCC CGGCGCGCGC TGCGCGGGGT CGAGCTGGCC
AGCACGGCCG ACGGCAAGGA GCCGGCCAAG GGCAGCACGC CCACCTTCGT TCGGCTGGCC
CGCACGCTGC GCGTGCAGCA GGGCGGACAG GCACACGCCG GCTGGCTGCA GCTGCGCTTC
GACATGGAGC GCGAGCAGAT GCTGCTGTCG GTCAGCGACT CGCTCGCCGC GGTGCTGCCG
ATCGTGATCA GCCGCGCACG CGCCATGCTC GACCTCGATG CCGAGCCGAT GGCCATCAAC
GCCGCGCTGC ACGAGGCCTT TCCGCATGGC GACGGCTTGC GCGTGCCCGG CACGGTCGAT
GGCTTCGAGC TCGCGGTACG CGCGGTGCTG GGCCAGCAGG TCACCGTGGC CGCCGCACGC
ACGCTGGGCT CGCGGCTGGT GGAGGCTTTC GGTGAGCCCA TCGCCACGCC GATCGAAGGC
CTGAATCGCC TGTTTCCGAC GCCCGCGGCA CTGGCGGCCG CGAGCGGCGA TGCACTCGGC
AAGCTCGGCA TCGTGCGCCA GCGCCAGGCC GCGCTGCAGG CCATCGCACG CGAGGTCGCT
GGCGGCAGGC TCGCGCTGCA TGCGGGCGCC GACGTGCCTT CGACCATTGC CGCGCTGCAG
GAGCTGCCCG GCATCGGCGC CTGGACCGCG CAGTACATCG CGATGCGTGC GCTGCGCTGG
CCCGACGCCT TTCCCGCGGG CGACGTGGCG CTGCAGAAGG CACTGGGCGT GAGCACCGAG
CGCGCGGCCA GCCAGGCGTC GCAGGCCTGG CGGCCCTGGC GCAGCTATGC GGTGCTGCGC
GCCTGGCATG CGCCGGCGCC CTCCTCTCCC GCTGCCGCCA CTGCAGCCCC GTCGGCGGCG
GCAGCGCCTT TCAACAACCT CACTACGGCA GGCGCCTCCG CCTGA
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| Protein sequence | MPTSHASTDA LESDACYLAM KTHDARFDGS FFTAVTSTGI YCRPVCRVKL PRRENCRFFR
HAAQAEAEGF RPCLRCRPEL APRAASWSTE DASRILALQA ARLIDEPDAW SEEGPGAAQI
AARLGVSDRH LRRIFEAQFG VSPLQYLQTR RLLAAKQLIA DTRLPMTQVA LASGFASVRR
FNAAFLEHYG LNPSALRRAG GGEGGEGKAI EVRLGFRPPY DVGAMLGFFA RRALRGVELA
STADGKEPAK GSTPTFVRLA RTLRVQQGGQ AHAGWLQLRF DMEREQMLLS VSDSLAAVLP
IVISRARAML DLDAEPMAIN AALHEAFPHG DGLRVPGTVD GFELAVRAVL GQQVTVAAAR
TLGSRLVEAF GEPIATPIEG LNRLFPTPAA LAAASGDALG KLGIVRQRQA ALQAIAREVA
GGRLALHAGA DVPSTIAALQ ELPGIGAWTA QYIAMRALRW PDAFPAGDVA LQKALGVSTE
RAASQASQAW RPWRSYAVLR AWHAPAPSSP AAATAAPSAA AAPFNNLTTA GASA
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