| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3724 |
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| Symbol | |
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| ID | 7973957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3922115 |
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| End bp | 3923491 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794308 |
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| Product | Three-deoxy-D-manno-octulosonic-acid transferase domain protein |
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| Protein accession | YP_002945606 |
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| Protein GI | 239816696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTCGC TGCTGCTGCG CCTCTACGGC GCCTTCACCA CCGCCGTGCA ACCGCTGGTT
CGCCGCAAGC TGCGGCGCAG GGCCGAGGCC GAGCCCGGCT ACGGCGTGGC CGTGGAGGAG
CGCTTCGGCC ACTACGACGA TGCAACCACC GGCGAGGGCC AGTGCTGGGT GCATGCAGTC
TCGCTCGGTG AAACGCGCGC GGCCGCCATC CTGATCGCCG AACTGCGCAG GCAGTACCCG
GGCATACCGA TCCTGCTCAC GCACGGCACC GCCACCGGCC GCGAAGAGGG CGCCAAGCTG
CTTGAACCCG GCGACACGCA GGTCTGGCAG CCCTGGGACA TGCCGGGCGC GGTGCAGCGC
TTTCTCGACC GCTTCCAGCC ACGCATCGGC GTGCTGATGG AAACCGAGGT CTGGCCCGAG
ATGGCTGCCG CCTGCGCCGA GCGCCGCATC CCCCTGGTGC TGGCCAATGC GCGGCTCAAC
GAGAAATCGC TGGCCGCGGC CGAACGCCTT GGCTGGCTCG CGCGGCCCGC CTATTCGGCG
CTGGCCGCCG TGTGGGCGCA GACCGAGGCC GACGCGCACC GGCTGGTGTC GCTGGGCGCC
AAGGTGGCCG GCATCTACGG CAACCTCAAG TTCGACGCTT CGCCCGATGC GCGCCAGCTG
GCCGCGGCCG CGACGCTGCG CGAGCGGCTG CCCAAGCCGA TGGTGGTGCT CGCGAGTTCG
CGCGACGGCG AGGAGCGCAT GCTGCTCGAC GTGCTCAGGC GCTTCGGCGC CACGGCGCCC
GTGCCGCCCG AGCAGGGCGC CATCCGCTCC ATTGCCAAGC GCGTGCACGA CGTGCAGTGG
ATGATCGTGC CGCGCCACCC GCAGCGCTTC GACGAAGTGG CTGCGCTGAT CGAAGCCGAG
GGCTTTGCCG TGGCGCGCCG CAGCGCCGCG GGCGAGCCGT CCGATGCCGA GATCTGGCTG
GGCGATTCGC TCGGCGAAAT GGCACTGTAC TACGGCCTGG CCGACGTCGC GCTGCTCGGC
GGAAGCTTCG AGCCGCTGGG CGGGCAGAAC CTGATCGAGC CGGCCGCCTG CGGCTGCCCG
GTGGTCATGG GGCCCTCGAC CTTCAACTTT GCCGAAGCGG CGCAGCTTTC GCTGGCGGCC
GGTGCCTCGC TGCGCGTCGA GAACATGGAG CAGGCGGTCA CCGCGGCGCT CAAGCTGGTC
GAGAACCCCG AGCGGCGCGC CGCCATGGCC GAGGCCGCGC TGGCTTTCTC GTCATCGAAC
CGCGGCGCCG CTGAACGCAC CGCAGCCGCG GTGCTGGCCA TCGCGCAGGC CGCCGACCCG
GTGGCGACCG AAGCCGCGCC GCTCGAGGAT GCGCGGGCGG AACCCACGCT CGAGTAG
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| Protein sequence | MRSLLLRLYG AFTTAVQPLV RRKLRRRAEA EPGYGVAVEE RFGHYDDATT GEGQCWVHAV
SLGETRAAAI LIAELRRQYP GIPILLTHGT ATGREEGAKL LEPGDTQVWQ PWDMPGAVQR
FLDRFQPRIG VLMETEVWPE MAAACAERRI PLVLANARLN EKSLAAAERL GWLARPAYSA
LAAVWAQTEA DAHRLVSLGA KVAGIYGNLK FDASPDARQL AAAATLRERL PKPMVVLASS
RDGEERMLLD VLRRFGATAP VPPEQGAIRS IAKRVHDVQW MIVPRHPQRF DEVAALIEAE
GFAVARRSAA GEPSDAEIWL GDSLGEMALY YGLADVALLG GSFEPLGGQN LIEPAACGCP
VVMGPSTFNF AEAAQLSLAA GASLRVENME QAVTAALKLV ENPERRAAMA EAALAFSSSN
RGAAERTAAA VLAIAQAADP VATEAAPLED ARAEPTLE
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