| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3722 |
|---|
| Symbol | |
|---|
| ID | 7973955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 3920201 |
|---|
| End bp | 3920539 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644794306 |
|---|
| Product | Rhodanese domain protein |
|---|
| Protein accession | YP_002945604 |
|---|
| Protein GI | 239816694 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC AAGTCCGCCC CGCCGATCTT GCCGCCTGGT TTGCGCAGCA TCCCGAGGCG
CCGCCCGTGC TGCTCGACGT GCGCGAGCCC TGGGAGCTGC AGACGGCCAG CGTTGCGCCG
CAGGGCTTCA CGCTCGTGGC CATCCCGATG AACGAGATTC CGGCGCGGCT TGCCGAACTG
GACGAGGGGC AGCGCATTGC ATGCCTGTGC CACCACGGTG CGCGCAGCCA GCGCGTGGCG
GCCTTCCTGA GCCAGAACGG CTTTGCCGAG CTCGCCAACG TGGCCGGCGG CATCGACGCC
TGGTCCGCAC AGCACGATCC CTCCGTGCCG CGCTACTGA
|
|---|
| Protein sequence | MIDQVRPADL AAWFAQHPEA PPVLLDVREP WELQTASVAP QGFTLVAIPM NEIPARLAEL
DEGQRIACLC HHGARSQRVA AFLSQNGFAE LANVAGGIDA WSAQHDPSVP RY
|
|---|
| |