| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3719 |
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| Symbol | |
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| ID | 7973952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3918089 |
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| End bp | 3918640 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794303 |
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| Product | peptide methionine sulfoxide reductase |
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| Protein accession | YP_002945601 |
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| Protein GI | 239816691 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.836534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCTT CATCGTCGCC CACTGAAACC ATCGTGCTCG GCGGAGGCTG CTTCTGGTGC
ACCGAGGCGG TGTTCGACCG CGTGCAGGGC GTGGTGGACG TCGAATCGGG CTATTGCAAC
GGCCAGGTCG TCAACCCGAG CTACGAGCAG GTCTGCACCG GCCGCACCGG CCATGCGGAG
GTGGTGAAGG TGGAATTCGA CCCCGCGGCC ATCAGCCTGC GCGAGATTCT CGAGATCTTC
TTCGTGGTGC ACGACCCCAC GAGCCTGAAC CGCCAGGGCA ACGATGTGGG CACGCAGTAC
CGCAGCGGCA TCTACTACAC GAGTGATGCG CAAAAGCAGG TGGCCGAAGA GGTCATCCGC
GAGATCGAGG CAAGCAAGAC CTACAGCGCG CCCCTCGTGA CCGAGGTGGC GCCGCTTGCC
AACTATTCGG CGGCCGAGGC CTACCACCAG GACTATTTCC TCAACAACCC GAACCAGGGC
TACTGCGCCT TCGTGGTCGG GCCCAAGGTC GAGAAGTTCC AGAAGACCTT CGCATCGCGC
GTCAAGGCCT GA
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| Protein sequence | MSSSSSPTET IVLGGGCFWC TEAVFDRVQG VVDVESGYCN GQVVNPSYEQ VCTGRTGHAE
VVKVEFDPAA ISLREILEIF FVVHDPTSLN RQGNDVGTQY RSGIYYTSDA QKQVAEEVIR
EIEASKTYSA PLVTEVAPLA NYSAAEAYHQ DYFLNNPNQG YCAFVVGPKV EKFQKTFASR
VKA
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