| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3716 |
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| Symbol | |
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| ID | 7973949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3914475 |
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| End bp | 3915425 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794300 |
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| Product | Auxin Efflux Carrier |
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| Protein accession | YP_002945598 |
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| Protein GI | 239816688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTCGT TCGTCATTTC TTCGCTGCTG CCGGTCGTCG TCCTGATCGC GGCAGGCTAC
CTGGCCGGCC GGCGCCGCTG GATCGGCGGC ACCGCCGTCA AGGACCTTTC CAACCTGATC
TTCCTGCTGC TTGCGCCGGC GCTGCTTTTC CGCGCGATGA GCACGGTGCA TGTGCAGGAG
CTGAGCCTGA AGCCGGTGGC GGCGTATTTC ATCGCCTCGG GCCTGCTGTT CGCGGGCACG
CTGGCGCTGC GCGGCTTCAA CCGCACGGCA GCCGTCATTG CGCTGGCCAA CACCTACAGC
AACACGGTGA TGATCGGCAT CGTGCTGGTC GGCCTGGCCT ATGGCGAGCA GGGCATGGTG
GTGCTGCTCA CGCTGATCTC GCTGCACTCG CTGGTGCTCC TGACCAGCGC CACGGTCGTG
CTCGAACTGG CGGTGGCGCG CGAGCATGCG CAGCGGGACG GCAACGAGAA GCGCCCCATG
GCGCGCACCG TGCTGCGCGC ATTGCGCAAC GCCATCATCC ACCCGGTGCC GATGCCGATC
ATCGCGGGGC TGCTGTTCGC GCAGACCGGG CTTGCGATGC CCGATTTCCT CGACAAGCCG
ATCCAGCTGC TCGGCCAGGC CTTCGGTCCG GTGGCGCTGG TGATGGTGGG CATCACGCTC
GCGCTGACGC CCGTCGGGCG GCACTGGCGC GAAGCGACGG TTCAGGCGCT GGTGAAGAAC
CTGCTGCATC CGCTGCTGGT GGCCGGCATC GGCTGGCTGC TGGGCGTGCG CGGCATACCG
CTCACCGTGA TGGTGGTGGC GGCGGCGCTG CCGATCGGCG CCAACGTCTT TCTCTTCTCG
CAGCGCTACC GCACATCGGA AGACCTGGTC ACGGCCAGCG TCGCGGTGTC GACGGTGCTC
GCGCTCGCGA CCCTGACGCT GGTCATGACG CTGGTGCAGT GGCTGCCTTG A
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| Protein sequence | MNSFVISSLL PVVVLIAAGY LAGRRRWIGG TAVKDLSNLI FLLLAPALLF RAMSTVHVQE
LSLKPVAAYF IASGLLFAGT LALRGFNRTA AVIALANTYS NTVMIGIVLV GLAYGEQGMV
VLLTLISLHS LVLLTSATVV LELAVAREHA QRDGNEKRPM ARTVLRALRN AIIHPVPMPI
IAGLLFAQTG LAMPDFLDKP IQLLGQAFGP VALVMVGITL ALTPVGRHWR EATVQALVKN
LLHPLLVAGI GWLLGVRGIP LTVMVVAAAL PIGANVFLFS QRYRTSEDLV TASVAVSTVL
ALATLTLVMT LVQWLP
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